Lonchura striata (white-rumped munia): 110484875
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Entry
110484875 CDS
T05897
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsr01009
]
110484875 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110484875 (VPS54)
Protein phosphatases and associated proteins [BR:
lsr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110484875 (VPS54)
Membrane trafficking [BR:
lsr04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
110484875 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
110484875
NCBI-ProteinID:
XP_021411514
LinkDB
All DBs
Position
3:complement(1450367..1495357)
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AA seq
977 aa
AA seq
DB search
MASSHSSSPVPQSNSSDAFFKKEVDATKHFRPVQSLPDVCPKEPTGNPNDLHDSPSLVVD
QQRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGMDFVDTEVTPSFYLPQITKEHFALY
QQEITPREKVHERCKNICTPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKISKIDKVMCEGSLRVLRLSLTRNNCIKVYNKLKLMATVHQTQ
PTVQLLLSTSEYVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFYEIYGDEMINTAKNIIKQCVVST
VSQIEEIDTEVVVKLADQMRMMNFPQWFDLLKNIFSKFTIFLKRVKATLNTIRSVVFLVL
DKNQKTRESRDLEDTLQKNSAKESMVDSEVAYLTHEGMFISDAFGEAELPAGAADSQRNA
SPSSEPCSSDSVSEPEGTTDSSSSKEHTSSSATPGGVEMMIGEDMKLTDLELVRLANNIQ
ELLYNASDICHDRSVKFLMARAKDGFLEKLNSSEFVTLSRLMEGFILDTEQICGRKSMSL
RGALQSQANRFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKP
TATEERKPAEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQFSML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEA
IYDLLPEEQTQMLFLRINASYKLHLKRQLAHLNVVNDGGPLNGLVTSDVAFYTGNLQALK
GLNNLDLNMAEIWEQKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcttcaccagtgcctcagtcgaacagcagcgatgctttcttt
aaaaaagaagtggacgccacgaaacacttccggcctgtgcagtccctgccagacgtgtgt
cccaaggagcccacaggcaatcccaatgacttacatgacagcccatctctagttgtggat
cagcaaagatggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggaatggactttgtggac
actgaagtcacgccttcattctacctcccacagatcaccaaggaacattttgcattatac
caacaggaaatcactccgagagagaaggttcatgaaaggtgcaagaatatttgtactcct
aaagatacctttgacaggacactattacacactcacgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgccttggaagattccttaacgtttaat
gccgttttaccatggtctcattttagtactgctggtggaaaaggaaatcgtgatgcagct
tcctccaagttgcttcaagaaaagctgagccattatctggacattgtggaagtcaatatt
gctcatcagatttctctccgttcagaagcattttttcatgcaatgacctctcagcatgag
ttgcaggactacctcaggaaaacctcccaggctgtaaaattgcttagagagaaaatctct
aaaattgataaagtaatgtgtgaaggatcgcttcgagttttaagactgtcgctcaccaga
aataactgtataaaagtgtacaataaactgaagttaatggctactgtacaccaaacacag
cccacagtacagctgctgctctccacttcggagtatgttggagctttggacttaatagca
acaacacaagaggtgttacaacaagagctgcaaggtattcacagtttccggcatcttggc
tcacagctttgtgaactggagaagctgatagataaaatgatgattgcagagttttcaact
tatgctcgtaatgatttaaatagacccctagaagatgattgccaaattctagaagaggag
agacttgtatctttagtatttggacttctaaaacaaaggaagctaaatttttatgaaata
tatggagatgaaatgattaatactgcaaagaatataattaaacagtgtgtggttagtacg
gtatcacagatagaagaaatagacacagaagtggttgttaagcttgcagaccagatgagg
atgatgaattttcctcagtggtttgatttactgaagaatattttttcaaaattcactatc
ttcctcaagagggtaaaggcaacgttaaatactatccgtagcgtggttttcttggttcta
gacaagaaccaaaaaaccagagaaagcagagacctggaggacacgttacagaagaactct
gctaaggagagcatggtggacagcgaggtggcctacctgacccacgaggggatgttcatc
agcgacgccttcggcgaggcggagctgccggccggagccgccgactcccaaaggaacgcc
tcccccagcagcgagccctgcagcagcgactccgtctccgagcccgagggcaccaccgac
tcctcctccagcaaggagcacacctcctcctctgccactccaggaggagtggagatgatg
atcggcgaggacatgaagctgactgacctggagctggtcaggctggcaaacaatatccaa
gagttactttataacgcctctgacatctgccacgatcgttcagtcaagttcctcatggca
agagcaaaggatggcttcctagagaagctgaattccagcgagttcgttactctttctcgc
ttgatggaaggctttatcttggatactgagcagatctgtggcaggaaaagcatgtccttg
agaggagctcttcagagtcaagccaatagatttgtgaataggtttcatgaggagaggaag
acaaaactaagcttgcttttggacaatgagcgctggaagcaagctgaggttcctgccgag
ttccaggaccttgttgattcggtgtcagatggcagaatttctctccctgaaaaaaaacca
acagctactgaagaaagaaagccagctgaattccttattgttgaaggacaaaaatatgca
acagttgggacagtattgctgctaataagaataatcctggagtactgccagtgtgtggat
aacattccttccatcaccactgacatgctgacccgcctgtcggatttactcaagtatttc
aactctagaagttgccaattagtgcttggagctggtgcattacaagttgttggcttgaaa
acaatcactacaaaaaacctagccctttcttcacgttgcctccagctcatcgtacactac
attcccattatcagggctcattttgaagctcggctgcagccaaagcagttcagcatgctc
aggcattttgaccacatcacaaaggattatcacgaccacatagctgaaatttcagcaaag
ctcgttgccataatggatagcttatttgacaaactattatccaagtatgaagtgaaagcc
cctgttccttcagcatgcttcaggaatatctgcaagcaaatggcaaagatgcatgaagct
atatatgatctccttcctgaggagcaaactcagatgttgtttttacgaattaatgcaagc
tacaaactccacctgaagaggcagctggcccacctcaatgtggtcaatgatggaggacct
ctgaacgggctggttacctcagatgtggctttttacactggaaaccttcaagctctgaaa
ggccttaacaacttagatctaaacatggctgaaatctgggagcagaagaggtga
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