Lonchura striata domestica (Bengalese finch): 110484921
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Entry
110484921 CDS
T05897
Symbol
CAPRIN1
Name
(RefSeq) caprin-1
KO
K18743
caprin-1
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110484921 (CAPRIN1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
110484921 (CAPRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
DUF1940
Motif
Other DBs
NCBI-GeneID:
110484921
NCBI-ProteinID:
XP_021411586
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All DBs
Position
5:59890098..59916166
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AA seq
705 aa
AA seq
DB search
MPSATNSTMASSTTGSSTGKAGPGSEAAPAAAAPQAAAGVNITTVQTEAMKQILGVIDKK
LRNLEKKKSKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQ
KTIKKTARREQLMREEAEQKRLKTVLELQFILEKLGDDEVRSDLKQGSSGVPVLTEEELT
MLDEFYKLVYPERDMNMRLNEQYEQASVHLWDLLEGKEKPVCGTTYKALKEIVERILQTS
YFDSTHNHQNGLCEEEEAAPAPAVEDTAAEAEPDPAEEFTEPTEVESTEYVNRQFMAETQ
FSSSEKEQVDEWTVETVEVVNSLQQQTQATSPPVPEPHALTAVAQADPLVRRQRVQDLMA
QMQGPYNFMQDSMLEFENQTLDPAIVSAQPMNPAQSLDMPQMVCPPVHAESRLAQPTQVP
VQPEATQVPLVSSTSEGYTASQPMYQPSHTAEQRPQKETIDQIQASMSLNADQTPSSSSL
PTASQPQVFQAGSSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQAS
YNQSFSNQPHQVEQSDLQQEQLQTVVGTYHGSPDQSHQVAGNHQQPPQQSTGFPRNSQPY
YNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQPQFNAPRDYSN
YQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNAQQVN
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggccaccaacagcaccatggcgagcagcaccaccggcagcagcaccggcaaa
gcgggaccgggcagcgaggctgctccggcggcggcggccccgcaggcggcggcgggtgtg
aacatcaccacggtgcagaccgaggccatgaagcagatcctgggggtgatcgacaagaag
ctgcgcaacctggagaagaagaagagcaaacttgatgattaccaggaacgaatgaacaag
ggagaacgtctgaatcaagatcaactggatgcggtgtcaaaataccaggaagtgacaaat
aatctggaatttgctaaggagctgcagaggagttttatggctctgagccaagatatccag
aaaacaataaagaagacagctcgtagggagcagttgatgcgagaggaggccgagcagaag
cgtttaaagactgtgctggagctgcagttcattctggagaagttgggggatgatgaagtg
cgcagtgacctcaaacaaggatccagtggcgtgccagtgctgacagaggaggaactgaca
atgctggatgagttttataagctggtttaccctgaacgagacatgaacatgaggttgaat
gagcagtatgagcaagcgtctgttcacctgtgggacttactggaggggaaggaaaaacca
gtttgtggaacaacctataaagcactgaaggagattgttgaacggattcttcagaccagt
tacttcgacagcacccacaaccaccagaatgggctatgtgaggaagaggaggcagcacct
gcacctgcagtagaagacactgcagcagaggctgaacctgatccagcagaagaatttact
gagccaactgaagttgaatcaactgagtatgtaaacagacaattcatggcagagactcag
ttcagcagtagtgagaaggaacaggtagatgagtggacagttgaaacggttgaggttgta
aattccctgcagcaacagacacaggcgacatctcctcccgtcccggaacctcacgcgctc
actgctgtggctcaggcagatcccctggtcaggagacagcgagtacaggacctcatggca
cagatgcagggcccctacaacttcatgcaggactcgatgctggaatttgagaaccaaaca
cttgatcctgccattgtatctgcacagcccatgaacccagcacagagtctggacatgcct
cagatggtttgccctccagttcatgctgagtcaagacttgcccagcctacccaagttcct
gtgcaaccagaagctacacaggttcccttggtttcttctacaagtgagggatatacagct
tcccaacccatgtatcagccttctcacacagcagagcaacggccacagaaagaaacaatt
gaccagattcaggcttccatgtctctgaatgcagaccagaccccatcctcatcatcactt
cccactgcatcccagccacaggtgttccaggctggatccagcaagcctttgcatagcagc
ggaatcaacgtcaatgcagctccattccaatccatgcaaacagtattcaacatgaatgca
cctgttcctcctgtgaatgagccagaaacccttaagcagcaaaaccagtaccaggccagt
tacaaccagagtttctccaatcaacctcaccaagtagaacaatcagatctccagcaagaa
caactccagacagtggttggtacctaccacggttccccggaccagagtcaccaagtggca
ggaaaccaccagcagcctccccagcagagcactggatttcccaggaacagccagccttac
tacaacagccggggcgtgtcccgggggggatcccgcggggcccggggcctcatgaacggt
tacaggggccccgcaaacggattcagagggggatacgatggctaccgtccttccttttcc
aacactccaaacagtggctacacacagccccagttcaatgctcctcgggattactcaaac
taccagagggatggatatcaacaaaatttcaaacgtggctctggacaaagtggacctcgg
ggagctcctagaggtcgtggagggccccctagaccaaacagagggatgcctcagatgaat
gctcagcaagtgaattaa
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