Lonchura striata (white-rumped munia): 110484947 Help Entry 110484947         CDS       T05897                                  Symbol DDB1 Name (RefSeq) DNA damage-binding protein 1   KO K10610   DNA damage-binding protein 1 Organism lsr  Lonchura striata (white-rumped munia) Pathway lsr03420   Nucleotide excision repair lsr04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:lsr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     110484947 (DDB1)   09124 Replication and repair    03420 Nucleotide excision repair     110484947 (DDB1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:lsr04121]     110484947 (DDB1)    03400 DNA repair and recombination proteins [BR:lsr03400]     110484947 (DDB1) Ubiquitin system [BR:lsr04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Adoptor protein      110484947 (DDB1) DNA repair and recombination proteins [BR:lsr03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       110484947 (DDB1)     TCR (transcription coupled repair) factors      Cul4-CSA complex       110484947 (DDB1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  110484947 NCBI-ProteinID:  XP_021411626 UniProt:  A0A218UVF8 LinkDB All DBs Position 5:complement(60530574..60542380) Genome browser AA seq 1140 aa AA seqDB search MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK TAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICF VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPHRE TDNTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS QEPKSLVSEWKEPNGKNISVASCNSNQVVVAVGRALYYLEIRPQELRQISCTEMEHEVAC LDITPLGDSNGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH YLLCALGDGALFYFGLSLETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSTSKLFSSSTAPHET SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE AEPKQGRIVVFHYSDGKLQSLAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLSHLGEFVNVFCHGSLVMQNLGET STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER KTEPATGFIDGDLIESFLDISRPKMQEVVANLQIDDGSGMKREATVDDLIKIVEELTRIH NT seq 3423 nt NT seq  +upstreamnt  +downstreamnt atgtcctacaactacgtggtgacggcgcagaagccgacggccgtcaatggctgcgtcacc ggacacttcacctctgcggaggacctgaacctgctgattgccaaaaacacccggctggag atttacgtcgtgacagccgaggggctccggcccgtcaaggaagtgggaatgtacgggaaa accgccgtcatggagctcttccgccccaagggggagagcaaggatttgctgttcatcctg acggccaagtacaacgcctgcatcctggaatacaagcagaacggggatagcattgacatc atcacccgtgcccatggaaacgtgcaggatcgcatcgggcgcccctcggagaccgggatc atcggcatcatcgatcccgagtgccggatgatcgggctgcggctctatgatggcctcttc aaggtcatccccctggatcgggacaacaaggaattaaaggccttcaacatccgcctggaa gagctccaggtcatcgacgtgaaattcctttacggctgccaagctcccaccatctgcttc gtctaccaggacccccagggccgccacgtgaagacatacgaggtgtccctgcgggagaag gaattcaataaaggcccttggaagcaggaaaatgtggaggccgaagcctccatggtcatc gcagtgccagagccctttggaggcgccattatcatcgggcaggaatccatcacctaccac aatggggataaatatctggctatcgctcctcccatcatcaagcaaagcaccattgtgtgc cacaaccgcgtggatcccaacggatcgcggtatttgctgggagacatggaagggcggctc ttcatgctgctcctggagaaggaggagcagatggatggcactgtcaccttgaaggatctg cgtgtggagctgctgggagagacatccattgccgagtgcctgacttacctggataacgga gttgtgtttgttggctccaggcttggagattcccagctcgtgaagctcaacgtggacagc aacgagcagggatcctacgtggtggctatggagaccttcaccaacctcgggcccatcgtg gacatgtgcgtggtggacctggagaggcaaggccaaggccagctggtcacctgctctggg gccttcaaagagggatcgctgcggatcatccggaacggcatcgggatccatgagcatgcc agcatcgacctgccgggaattaaaggattgtggccattgaggtcagatccacaccgggag acggacaacaccttggtgctgtcatttgttggccagaccagggttctgatgttgaacgga gaggaagtggaagaaacagagctcacaggatttgtggatgaccagcagacgttcttctgt ggcaatgtggcgcatcagcagctgatccagatcacgtctgcatcggtgcgactggtcagc caagagcccaaatccctggtgagcgagtggaaagagcccaatgggaagaacatcagcgtt gcttcctgcaacagcaaccaggtggtggtggctgtgggaagagccttgtactacctggaa atccgcccccaggagctccggcagatcagttgcacggagatggagcacgaggtggcttgc ctggacatcacccccctgggagactccaacgggatgtccccgctctgtgccatcgggctc tggactgacatctctgcccgcatcctgaagctcccatccttcgagctgctgcacaaggag atgctgggaggagagattatccctcgctccatcctgatgacaacctttgagagcagccac tacctcctgtgtgccctcggggatggagctctcttctactttggcctcagccttgagaca ggcttgctgagtgacaggaagaaggtgaccctgggcacacagcccacggtgctgaggaca ttccgctccttgtccaccaccaacgtgtttgcctgctctgaccgccccaccgtcatctac agcagcaaccacaagctggtcttctccaacgtcaacctcaaggaggtcaactacatgtgc cccctcaattccgacgggtatcccgacagtttggccttggccaacaacagcaccctgacc attggcaccattgatgagatccagaagctgcacatccgcactgttcccctctatgagtca cccaggaaaatctgctaccaagaggtatcccagtgtttcggggtgctctccagccggata gaggtgcaggatgccagtgggggcaccacggcactcagacccagtgccagcacccaggcc ttgtccagcagtgtgagcaccagcaagctgttttccagcagcacagctccgcacgagaca tcctttggagaggaggtggaagtgcacaacctgttaatcatagaccagcacaccttcgaa gtgctccatgctcaccaattcctgcaaaatgagtatgccctcagcctggtctcctgcaag ctgggaaaggatcccaacacctacttcattgtgggcactgccatggtgtatcccgaggaa gcggagcccaagcagggccggatcgtcgtcttccactactccgatgggaagctgcagagc ctggctgagaaggaggtcaagggagctgtgtattccatggtggaattcaacgggaagctg ttagccagcatcaacagcacggtccgcctgtacgagtggacagcagagaaggaattgcgc acggagtgcaaccactacaacaacatcatggccctgtacctgaaaaccaagggggatttc atcctggtgggagacctcatgcgctccgtgctgctcctggcctacaaacccatggaaggg aattttgaggagattgcccgggatttcaatccaaactggatgagtgctgtggaaatcctg gatgatgataatttcttgggagcagagaacgctttcaatctattcgtgtgccagaaggac agcgcggccacaacggatgaggagcggcagcacctgcaagaagtgggattatcccacctg ggagagtttgtcaatgtcttctgccatggatccctggtcatgcagaacttgggagagact tccacgcccacccagggatccgtgctctttggcactgtcaatggaatgatcggcctggtg acatccctgtcggaaagctggtacaacctgctcctggacatgcagaacaggctcaataaa gtcatcaagagcgtggggaagattgagcattctttctggagatccttccacaccgaacga aagacggaaccagccacaggattcatcgatggagacttgattgagagttttctggacatc agcaggcccaagatgcaggaagtggtggcaaacctgcagattgacgatggaagcgggatg aagagggaagccaccgtggatgacctgataaagattgtagaggagctgacccggatccat tag

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