Lonchura striata (white-rumped munia): 110484976
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Entry
110484976 CDS
T05897
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110484976 (SSRP1)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110484976 (SSRP1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
110484976 (SSRP1)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
110484976 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
POB3_N
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
110484976
NCBI-ProteinID:
XP_021411678
UniProt:
A0A218UVK8
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Position
5:61071609..61077927
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AA seq
705 aa
AA seq
DB search
MADTLEFNEIYQEVKGSMNDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGH
GLKLLTKNGHVYKYDGFRESEFDKLSDFFKAHYCLELAEKDLCVKGWNWGTVRFGGQLLS
FDIGEQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMKQSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDS
SFNPGEEDDDVAEEFDSNASASSSSGDGDSDRDDKKPAKKAKIVKDRKPRKKQPESKKGK
DPNAPKRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAED
ARRDYEKAMKEYSVGSKADSHRGEKSKKKKKKQEKQVKGKGDKKGATSKSSSSKSPAKGM
SDSFKSKEFVSSDESSSAESKKEDSEDEGAASPAPSSEDSASGSD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgctggagttcaacgagatataccaggaggtgaagggctccatgaatgat
gggcggctgcggctgagccggcagggcgtcatcttcaagaacagcaagacagggaaggtg
gacaacatccaggcctcagagctggctgagggtgtgtggcggcgcgtggcactgggccac
ggcctcaagctgctcaccaagaacggccacgtctacaagtatgatgggttccgggagtcg
gaatttgacaagctgtcagatttcttcaaggcccactattgcctggagctcgcagagaag
gatctgtgtgtgaagggctggaactggggcacagtgaggtttggagggcagctgctgtcc
ttcgacatcggggagcagccggtgttcgagatcccgctcagcaacgtatcccagtgcacc
acaggcaagaacgaggtgacgctggagttccaccagaacgatgacgccgaggtctcactc
atggaggtccggttctacgtgccccccacccaggaggatggtgtggaccccgtggaggcc
ttcgcccagaacgtgctgtccaaggcggacgtgatccaggccaccggagacgccatctgc
atcttccgggagctgcagtgtctgacgccgcgcgggcgctacgacatccgcatctacccc
accttcctgcacctgcacggcaagactttcgactacaagatcccctacaccaccgtgctg
cgcctcttcctgctcccgcacaaggaccagcgccagatgttcttcgtaatcagcctggac
cccccgataaagcaaggccagacccgctaccacttcctgatcctgctcttctccaaggat
gaggacatctccctgaccctcaacatgaatgaggaggaggtggagaagcgctttgagggg
cggctcaccaagaacatgtccgggtccctctacgagatggtcagccgggtgatgaaggca
ctggtgaaccgcaagatcaccgtgcccggaaacttccagggacactccggagcccagtgc
atcacctgctcctacaaggccagctcagggctgttgtacccgctggagaggggcttcatc
tacgtgcacaagccccccgtgcacatccgcttcgacgagatctccttcgtcaacttcgcc
cgcggcaccaccaccacccgctcctttgacttcgagatcgagaccaagcagggcacccag
tacaccttcagcagcattgagagggaggagtacgggaagcttttcgacttcgtcaatgcc
aagaagctgaacatcaagaaccggggcctgaaggagggaatgaagcaaagctatgatgaa
tatgctgactctgacgaggaccagcacgatgcctacttggagaggatgaaagaggagggc
aagatccgggaagagaatgccaatgacagcagtgatggctctggggaggagacagactcg
tccttcaaccctggagaagaggatgatgacgtggctgaagagttcgacagcaacgcctcg
gccagttcctccagcggtgacggcgacagcgaccgtgacgacaagaaaccggccaagaag
gccaagatcgtcaaggaccgcaagccccgcaagaagcagccggagagcaagaaggggaag
gaccccaacgctcccaagcgcccaatgtcagcctacatgctctggctgaatgccaaccgg
gagaaaatcaagtcggaccaccctggcatcagcatcaccgatctgtccaagaaggctggg
gagctctggaaggccatgtccaaagagaagaaggaggagtgggatcggaaggcagaagat
gccaggcgggactacgagaaggccatgaaggaatacagtgtgggcagcaaggccgacagc
cacaggggggagaagtcgaagaagaagaagaagaagcaagagaagcaggtgaaggggaag
ggggacaagaaaggtgccacctccaagtcctcatcctccaagtccccagctaagggcatg
agcgacagcttcaagagcaaggaattcgtatccagtgatgagagctcctctgcagagagc
aagaaggaggactccgaggatgagggagctgccagcccagcccccagctcagaggactct
gcctccggctcggattag
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