Lonchura striata (white-rumped munia): 110484989
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Entry
110484989 CDS
T05897
Symbol
DTX4
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110484989 (DTX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsr04121
]
110484989 (DTX4)
Enzymes [BR:
lsr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110484989 (DTX4)
Ubiquitin system [BR:
lsr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110484989 (DTX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_2
zf-ANAPC11
zf-RING_11
WWE_5
zf-RING_Vps41
zf-RING_5
zf-UDP
zf_RING_Vps8_fungal
PHD
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
110484989
NCBI-ProteinID:
XP_021411699
UniProt:
A0A218UUM3
LinkDB
All DBs
Position
5:61204204..61211567
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AA seq
617 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVSHHIEAVARAGPRAGGSVVLGQADSRLAPYIIDL
QSMHQFRQDTGTIRPVRRSYYDPSSAPGKGVVWEWENDSGTWTPYDMDVGITIQRAYEKQ
HPWVDLSAIGFCYVIDFATMGQINRQTQRKRRVRRRLDMVYPLVSGTLPKSQSWPASPGA
AAAPPVPACTCPQCLLVMSVKAAAGGPGTSTLQPRKAAPAPPAAPRPALPAAGPKAPDGV
AAARGSLKPLAAQGGRRQAASTPALSSAGASGSPPGVGSGKGTRPSLGTLNRSHLQRLAI
AQSRVLIASGVPTVPVKNLTGSSPVNPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVS
KSEIQSIPGISHSCRKTTKKQAKKGKTPEEVLKKYLQKVRHPPDEDCTICMERLSAPSGY
KGPQPAVKPDLVGKLVKCSHAFHLHCLVAMYNNGNKDGSLQCPTCKTIYGVKTGTQPPGK
MEYHIIPHALPGHADCKTIRIIYNIPPGVQGPEHPNPGKSFTARGFPRHCYLPDSEKGRK
VLKLLLVAWDRRLIFAIGTSSTTGESDTVIWNEIHHKTEFGSNLTGHGYPDINYLDNVLA
ELAAQGITEESLAQEKD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgctgctggcctcggccgtggtggtgtgggaatggctgaacgagcacgggcgctggcgg
ccctacagcccggccgtcagccaccacatcgaggcggtggcccgcgccgggccgcgggcg
ggcggcagcgtggtgctgggccaggccgacagccgcctggcgccctacatcatcgacctg
cagtccatgcaccagttccgccaggacaccggcaccatccggcctgtccggcgcagctac
tacgacccgtcctcggcgccgggcaagggagtcgtctgggagtgggagaatgacagcggg
acgtggacgccctacgacatggacgtgggcatcaccatccagcgcgcctacgagaagcag
cacccctgggtggacctgagcgccatcggcttctgctacgtcatcgacttcgccaccatg
ggccagatcaaccggcagacccagcgcaagcgccgcgtccgccgccgcctcgacatggtc
tacccgctggtgtcgggcaccctgcccaagtcgcagtcgtggccggccagccccggggcg
gcggcggccccgccggtgcccgcctgcacgtgtccccagtgcctcctggtcatgagcgtc
aaagccgccgccggcggccccggcacctccaccctgcagccccgcaaagccgcccccgcg
cccccggccgcccccaggcccgcactgcccgcggcagggccgaaggcaccggacggcgtg
gccgcggcacgcggctcgctgaagccgctggcggcgcaggggggccggcggcaggcggcc
agcacgcccgccctgagctcggccggcgcctctggcagcccccccggcgtgggcagcggc
aaaggcacccggcccagcctcggcaccctgaaccgcagccacctgcagcgcctggccatc
gcccagtcccgcgtgctcatcgcctccggggtccccactgtccctgtgaagaacctcact
ggctccagccccgtcaacccagcactggcagggatcacgggaatcctcatgagcgcggcc
gggctgcccgtgtgcctgacccggccccccaagctggtgctgcaccccccgcccgtcagc
aagagcgagatccagtccatccctggcatctcccactcctgccgcaagaccaccaagaaa
caggccaagaagggtaaaaccccggaggaggtgctgaagaaatacctgcagaaagtgcgg
catccgccagatgaggactgcaccatctgcatggagcggctctctgccccctctggctac
aaggggccccagccggccgtcaagcctgacctcgtggggaagctggtcaagtgcagccac
gcgttccacctccactgcctggtggccatgtacaacaacggcaacaaggatgggagtctg
cagtgtcccacctgcaaaaccatctatggggtgaagacagggacgcagcctcccgggaag
atggaatatcacatcatcccccacgcactgcccggccacgccgactgcaaaaccatccgc
atcatctacaacatccccccgggggtgcagggaccagagcatccaaaccctgggaagagc
ttcacggcccgtggcttcccccggcactgctacctgccagacagcgagaagggcaggaag
gtactgaagttgctgctggtggcttgggaccggcgcctgatcttcgccatcgggacctcg
agcaccacgggcgagtcggacacggtgatctggaacgagatccaccacaagacagagttc
ggctccaacctcactggccacggctaccccgacatcaactacctggacaatgtcctggct
gagctggcagcccagggcatcacggaggagagcctggcgcaggagaaggactga
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