Lonchura striata (white-rumped munia): 116183444
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Entry
116183444 CDS
T05897
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein 8-like
KO
K08332
vacuolar protein 8
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
116183444
03029 Mitochondrial biogenesis [BR:
lsr03029
]
116183444
Membrane trafficking [BR:
lsr04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
116183444
Other autophagy associated proteins
Micronucleophagy
116183444
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
116183444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
ARM_ARMC5
HEAT_2
Arm_2
Cnd1
V-ATPase_H_N
KAP
TOR1L1_N
CTNNBL
Motif
Other DBs
NCBI-GeneID:
116183444
NCBI-ProteinID:
XP_031360350
LinkDB
All DBs
Position
3:49221782..49245030
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AA seq
609 aa
AA seq
DB search
MGQLCGRCMQLLRDFIGFVQRMSSDLVQGIKECLILISKCSCLKQNSSKNGQLYKPILQP
HERVTAQEFLQHIETDFEMSPLGKDPLEALRTLSFSENPALQQSAALYYLHMSQHMSIPL
PVEHLEPFYALLRSADLEVQQMSSLSLVNFLLEGNIDKELVVQMGLLEPILDLLESEDPT
VQCNSCACIMTLAVSESNQEAIGAARGVTPLLSLANSYDPRVQQNAVGAILNLTQSEKIQ
QVLCKEGALPVLALLLESPDSEVQYYSCAALSNVAANVQHHKALLRPSDRFLLRTLISLL
SSSVDKVSSQACVCLRNLATSVDIQAEMVAENVLPKLCSLLASGNEDVRRASIALLWILS
QHPPNQDTLACSELLQSLGTLLAAHKTDPVIVGHTACIIKNLSLSKNRQRITESCCVEGL
LQTMLLTDTQEDYLRYVTSCLAELAKQEGAMLHMVKWMDEPLTKCLVRLAGQLEHPEPSF
HAASIIHHTISHERMMLLWKHHIGEIQAYLKNFLTHQEVRFQQLGISTLCKLRAGMSFLP
RLPASISSKQALLSNRSQNHWGWKRPPRXVQALTVQTSLETSSTHLRKLNNLKNSCYMFF
KQLFKSISQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagctatgtggacgatgtatgcagctcctccgggacttcataggctttgttcaa
aggatgtcctctgacttggtgcaaggcatcaaggaatgcttaattctgataagcaaatgc
tcctgcttaaaacaaaacagctctaaaaatggacagctgtacaagcccatcctacagcct
catgagagagtgacagcacaggagtttctgcagcatattgaaacagattttgaaatgtct
ccactgggaaaggaccctttggaagccttgaggaccttatccttttcagaaaacccagct
ttacagcagtcagctgccctctattacttgcatatgagccagcacatgagcatcccccta
cctgtggagcatctggaacccttctatgccttactacgttctgctgacctggaagtgcag
cagatgtcttccttgtcccttgtcaacttcctgctggaaggaaatattgacaaagaatta
gttgtccaaatgggtttacttgagccaattttggatctgcttgaatcagaggatcccact
gtccagtgtaattcctgtgcctgcatcatgactttggcagtttcggagtccaaccaagag
gctattggtgctgctagaggagttacacccctactgtctcttgccaattcatatgatccc
agagtccaacaaaatgcagttggtgctattctgaacctcacacaatcagagaaaatccaa
caagtcctatgcaaggaaggagccctaccagttcttgccttgcttctggaatctcctgac
tcagaagtccagtattacagctgtgctgccctgagcaatgtggcagccaatgttcagcac
cacaaagccttgctgagacccagtgacagattcctgctgaggacactgatctctctccta
tcctcttctgtggacaaggtttcaagccaggcatgtgtttgcctaagaaacttggctacc
agtgtggacatccaggctgagatggttgctgagaacgtcctgcccaagctgtgctctctc
ctggcctctggaaacgaggatgtgcgtcgtgcctccattgctctgctctggatactctcc
cagcacccgcccaaccaggacactctggcatgttctgagctactgcagagcctggggacg
ttactggcagcacataaaacagaccctgtgattgttggacatactgcttgcatcatcaaa
aacctgagcctttccaaaaacagacagagaatcactgagagctgctgtgttgaaggtctc
ctccagaccatgcttttgactgacactcaggaagactaccttcgttatgtgacatcctgc
cttgctgagctagcaaagcaagaaggagccatgttacacatggtcaagtggatggatgaa
cctttgacaaagtgcttggtaagactggctggccaactcgaacatcctgagccatctttc
catgctgcctccatcatccatcacacgatcagtcacgaaagaatgatgcttttgtggaag
catcacattggagagattcaagcctacctcaagaattttcttacccaccaagaggtccgt
tttcagcagctgggcatctccacactctgcaaactacgagcaggtatgtccttcctgcca
aggctgcctgcatccatcagcagcaaacaggcactgcttagtaacagatcacagaatcat
tggggttggaaaagacctccaagatgagtccaagcactgacagtgcaaacttctctggag
acaagctctactcacttaagaaaactgaataatctcaagaatagctgttacatgtttttt
aagcagctctttaagagtatctcccaataa
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