Lonchura striata (white-rumped munia): 116184138
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Entry
116184138 CDS
T05897
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
116184138
Cell adhesion molecules [BR:
lsr04515
]
Cadherins
Protocadherins
116184138
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
TraQ_transposon
Motif
Other DBs
NCBI-GeneID:
116184138
NCBI-ProteinID:
XP_031361923
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Position
13:complement(2429458..2450804)
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AA seq
527 aa
AA seq
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VSEDGRQHFRLERASGRLVVAGRLDREELCGQAATCMLPFELLLSNPLQFFRVEVTLDDI
NDHSPVFPEERVTYKIVERSDPGSRFPLVGARDPDIGSNTVQEYSISPENEYFRLSYGSR
TNDDKYLEIVLENPLDREEHAEMGFSVIAVDGGSPPRSGSIEISIIILDVNDNAPIFMQE
RYIGRVMENMPAGSVVLTVLATDQDAGVNGDIFYELSQSVVQADSAFVIDPITGEIKLTK
PLDFEAAQYHDLIVRATDGGGLSAICKVLVEVVDVNDNAPELVLSSFSSPLPEDTVPGTV
VALFSVRDRDSGANGKISCALEDQLSFSLRPAYKNYYELVTVSALDREETPQYILSVTAA
DAGSPPLAEGSGCVSLGAAPGGGGGKLGLKTMRSLLAAPSATHRLRLWRCEYDQLPTSLA
HTSVVGPGPESTAARGAHVQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFKFLRPILPS
LPPQHCALGQGPAEEQDFPCVPVSTEDMAPDNAGTLSAGQLNALSFD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtctcggaggacgggcggcagcattttcgcttggagcgcgcctccggccgcctcgtcgtg
gcggggaggctggaccgggaggagctgtgcggccaggccgccacctgcatgctccccttc
gagctgctgctctccaaccccctgcagttctttcgggtcgaggtgactctggacgatatc
aatgaccattcacccgtcttccccgaggaacgagtcacttacaagatcgtggaaaggagc
gatccaggctctcgtttcccactggtgggtgctagggaccccgatattggcagtaacaca
gtccaggagtacagcatctctcccgagaatgagtatttcaggttgtcatacggaagtcgg
actaatgatgacaaatatctcgaaattgttttggaaaatccattagacagagaggagcat
gcagagatgggtttcagtgttattgctgtggatgggggctctcctccgaggagtgggagt
atcgagatctctattatcattctggatgtaaatgacaatgctcccatcttcatgcaagag
cgttatattgggagggttatggaaaacatgccagcaggctctgtggttctgactgtgctg
gcaactgatcaggatgcaggagtaaatggagacatcttctatgaacttagccagtcagtt
gtacaggcagactcagcatttgtgattgatcccataactggtgaaattaaactcacaaaa
cctctggactttgaggcagcacagtatcacgacctgattgtgagggccacagatggtggg
ggcctctcagcaatctgcaaagtgctggtggaggtggtggatgtgaacgacaatgcccca
gagctggtgctcagttccttcagcagtcccctccctgaggacacagtgcccggcacggta
gttgccctgttctcggtcagggaccgggattctggcgccaacgggaagatctcctgtgcc
ctcgaggatcagctctccttctccctgcggccagcctataagaattactatgagctggtg
acagtgagcgcgctggaccgcgaggagacgcctcagtacatcctgagtgtcacggcagca
gatgcggggtcgcctcctctagcggagggctccggctgcgtgtccttgggcgcggcgccg
ggcggcggcggagggaagttggggctgaaaaccatgaggtcgctcttggccgcgccgtcc
gccacgcacaggctgcggctgtggcgctgcgagtacgaccagctgcccacttcgctggcg
cacacgagcgtcgtgggcccgggccccgagagcacggccgcccgcggcgcccacgtgcag
agcggcctggccgatgcagccgctgcagggaccctgccccgcgcctattgctacgagatc
agcctcacaacgggctcgggcaacagcgagttcaaattcctcaggcccatcctgcccagc
ctgcccccacagcactgcgccctgggccagggccccgctgaggagcaggattttccctgt
gtccctgtcagcacagaggacatggccccagacaatgctgggactctctctgcaggacag
ctcaatgctctttcctttgactga
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