KEGG   Lonchura striata (white-rumped munia): 116184138
Entry
116184138         CDS       T05897                                 
Name
(RefSeq) protocadherin beta-15-like
  KO
K16494  protocadherin beta
Organism
lsr  Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lsr04515]
    116184138
Cell adhesion molecules [BR:lsr04515]
 Cadherins
  Protocadherins
   116184138
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 TraQ_transposon
Other DBs
NCBI-GeneID: 116184138
NCBI-ProteinID: XP_031361923
LinkDB
Position
13:complement(2429458..2450804)
AA seq 527 aa
VSEDGRQHFRLERASGRLVVAGRLDREELCGQAATCMLPFELLLSNPLQFFRVEVTLDDI
NDHSPVFPEERVTYKIVERSDPGSRFPLVGARDPDIGSNTVQEYSISPENEYFRLSYGSR
TNDDKYLEIVLENPLDREEHAEMGFSVIAVDGGSPPRSGSIEISIIILDVNDNAPIFMQE
RYIGRVMENMPAGSVVLTVLATDQDAGVNGDIFYELSQSVVQADSAFVIDPITGEIKLTK
PLDFEAAQYHDLIVRATDGGGLSAICKVLVEVVDVNDNAPELVLSSFSSPLPEDTVPGTV
VALFSVRDRDSGANGKISCALEDQLSFSLRPAYKNYYELVTVSALDREETPQYILSVTAA
DAGSPPLAEGSGCVSLGAAPGGGGGKLGLKTMRSLLAAPSATHRLRLWRCEYDQLPTSLA
HTSVVGPGPESTAARGAHVQSGLADAAAAGTLPRAYCYEISLTTGSGNSEFKFLRPILPS
LPPQHCALGQGPAEEQDFPCVPVSTEDMAPDNAGTLSAGQLNALSFD
NT seq 1584 nt   +upstreamnt  +downstreamnt
gtctcggaggacgggcggcagcattttcgcttggagcgcgcctccggccgcctcgtcgtg
gcggggaggctggaccgggaggagctgtgcggccaggccgccacctgcatgctccccttc
gagctgctgctctccaaccccctgcagttctttcgggtcgaggtgactctggacgatatc
aatgaccattcacccgtcttccccgaggaacgagtcacttacaagatcgtggaaaggagc
gatccaggctctcgtttcccactggtgggtgctagggaccccgatattggcagtaacaca
gtccaggagtacagcatctctcccgagaatgagtatttcaggttgtcatacggaagtcgg
actaatgatgacaaatatctcgaaattgttttggaaaatccattagacagagaggagcat
gcagagatgggtttcagtgttattgctgtggatgggggctctcctccgaggagtgggagt
atcgagatctctattatcattctggatgtaaatgacaatgctcccatcttcatgcaagag
cgttatattgggagggttatggaaaacatgccagcaggctctgtggttctgactgtgctg
gcaactgatcaggatgcaggagtaaatggagacatcttctatgaacttagccagtcagtt
gtacaggcagactcagcatttgtgattgatcccataactggtgaaattaaactcacaaaa
cctctggactttgaggcagcacagtatcacgacctgattgtgagggccacagatggtggg
ggcctctcagcaatctgcaaagtgctggtggaggtggtggatgtgaacgacaatgcccca
gagctggtgctcagttccttcagcagtcccctccctgaggacacagtgcccggcacggta
gttgccctgttctcggtcagggaccgggattctggcgccaacgggaagatctcctgtgcc
ctcgaggatcagctctccttctccctgcggccagcctataagaattactatgagctggtg
acagtgagcgcgctggaccgcgaggagacgcctcagtacatcctgagtgtcacggcagca
gatgcggggtcgcctcctctagcggagggctccggctgcgtgtccttgggcgcggcgccg
ggcggcggcggagggaagttggggctgaaaaccatgaggtcgctcttggccgcgccgtcc
gccacgcacaggctgcggctgtggcgctgcgagtacgaccagctgcccacttcgctggcg
cacacgagcgtcgtgggcccgggccccgagagcacggccgcccgcggcgcccacgtgcag
agcggcctggccgatgcagccgctgcagggaccctgccccgcgcctattgctacgagatc
agcctcacaacgggctcgggcaacagcgagttcaaattcctcaggcccatcctgcccagc
ctgcccccacagcactgcgccctgggccagggccccgctgaggagcaggattttccctgt
gtccctgtcagcacagaggacatggccccagacaatgctgggactctctctgcaggacag
ctcaatgctctttcctttgactga

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