Legionella spiritensis: NCTC12082_00458
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Entry
NCTC12082_00458 CDS
T06800
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lss
Legionella spiritensis
Pathway
lss03410
Base excision repair
lss03430
Mismatch repair
lss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12082_00458 (recJ)
03430 Mismatch repair
NCTC12082_00458 (recJ)
03440 Homologous recombination
NCTC12082_00458 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lss03400
]
NCTC12082_00458 (recJ)
DNA repair and recombination proteins [BR:
lss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC12082_00458 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC12082_00458 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC12082_00458 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
VEG90042
LinkDB
All DBs
Position
1:522880..524616
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AA seq
578 aa
AA seq
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MRIKQRNIPDMSPTLLSQLPSILQRIYASRGITDEAQLDKRLQTLLPFDTLKDIDKACIR
LETALREQQRMLIIGDFDADGATSTALAVSALRTMGAKQVDFLVPNRFEFGYGLTPAIVE
VAKKWQPHLIITVDNGISSIDGVDAANQANIDTLITDHHLPGEEIPNACAIVNPNQAGDD
FASKSIAGVGVIFYVMLALRRHLSNANWFASQDMNEPNMAQFLDLVALGTVADVVALDQN
NRILVNQGLARIRQGLCRPGIKALIDVAGRTCARLRESDLGYAIAPRLNAAGRLDDMSLG
IACLLSADERHARTLAERLDELNQERRIIETEMKEQAMAGVEQMIKRIESGHHLPLALCL
MDESWHQGVIGILAGRLKERYHRPVIAFAKVSDTELKGSARSVPGLNIRDALAAVDKDYP
GLITKFGGHAMAAGLSLPPQSFDKFRDAFLAEVGRHLSPGQCEGELLTDGPLAPGEFSLA
TADLLQQAGPWGQLFPEPCFDNIFEVLEQRIVGQNHLKLSVAHPESGEVLDAIAFNVDRN
LWPNHRIKEIHVAYKLDINVYQGRTRLQLMVEALNPVA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaaacaacgaaatattcctgatatgtcgcccacgctgctgtcacagctaccg
tctatattgcaacgaatttacgcgtcccgcgggattactgatgaagcccaactggacaaa
cggctgcagaccttattgcctttcgacacgttaaaagacattgataaagcctgcatacga
ctggaaacggcgctcagggaacagcaacgtatgttaatcatcggtgattttgacgcggat
ggggcaacgtcaaccgcacttgccgtgtcggcgttgcggacgatgggggcaaaacaggtg
gattttcttgttcccaatcgctttgagtttggttatggtctgacgccggccatcgtggaa
gtagcaaaaaaatggcaaccgcatttaatcatcaccgtcgataatggtatttcaagtatt
gacggtgttgacgcggccaatcaggccaatattgacacgttgataactgatcatcatttg
cccggtgaagaaattcccaacgcttgcgctattgtcaaccccaatcaggcgggcgatgac
tttgcaagcaaatccattgccggagttggcgtgatcttttatgtgatgctcgccctgcgc
cgtcatctgagcaatgcgaactggttcgcgtcacaagatatgaacgaacccaatatggcg
cagtttctggatctggtcgcgttaggtaccgtcgcagatgtcgttgccctggatcaaaat
aaccgtattctggtgaaccagggattagccagaatacggcagggattatgtcgtccggga
atcaaggcattgattgacgtggcaggaagaacctgtgccagattgcgggaaagtgatttg
ggctacgctatcgcgcctcgccttaatgcagccggccgtctggatgatatgtcgcttggt
attgcctgtctgctaagcgctgatgaacgacatgcgcggacattggccgagaggcttgat
gaattgaatcaggagcggcgaatcatcgagacggaaatgaaagagcaggccatggctggt
gtagaacagatgatcaagcgcatagagagcgggcatcatttgcctctggcattatgtttg
atggacgagtcatggcatcagggtgtgattggtattttggcgggacgtttaaaggaacgt
tatcataggccggttatcgctttcgccaaggtgagcgacacggagttaaagggatcggcg
cgctcggttcccggtttaaacatacgggatgccctggcggcggttgacaaggattatcct
ggtttaatcactaaatttggcgggcatgccatggcggccggcctcagtttaccgccgcaa
tcgtttgacaaattccgcgacgcttttctcgccgaagtgggccgtcatctgagtccgggt
caatgtgaaggggagctgttaaccgatgggccgttggcgccgggagaattcagtctggcg
acggctgatttgctacagcaggccgggccatggggacaattgtttccggagccttgcttc
gataatatttttgaggtactggagcagcgcattgtaggacaaaatcacctgaaactcagc
gtcgcgcatcctgaaagcggtgaggttctggatgctattgcttttaatgttgacaggaat
ctctggcccaatcaccgtattaaagaaattcatgtggcttataaactggatattaacgtg
tatcagggacgaacacgcttgcaactaatggttgaggcgttaaatccggtagcctga
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