Legionella spiritensis: NCTC12082_00617
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Entry
NCTC12082_00617 CDS
T06800
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lss
Legionella spiritensis
Pathway
lss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12082_00617 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lss03019
]
NCTC12082_00617 (pcnB)
Enzymes [BR:
lss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NCTC12082_00617 (pcnB)
Messenger RNA biogenesis [BR:
lss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC12082_00617 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Flu_PB2_1st
Motif
Other DBs
NCBI-ProteinID:
VEG90200
LinkDB
All DBs
Position
1:689759..691114
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AA seq
451 aa
AA seq
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MTTIIKLIKKLLRKNRTRHVPADANYIIPRNRHNLSKTDISANALKVLNRLNGAGFEAYL
VGGSVRDLLLGKSPKDFDVATNATPNQIKKLFRNARIIGRRFKLVHIIFHRDIVEVATFR
GNETNEIIDNNHQRNEQGMLVRDNIYGSLDEDAWRRDFTINSLYYNLEDSSIVDFTGGVN
DVRQRLVRMIGEPSARYKEDPVRMLRAIRFSAKLHFELAPETSEAILKLNHLIRHISGSR
LFDEITKMYQCGEAASIQRLLVKYGLFAQLFEQTDRLLDSDYPVNALLGIALENTDSRIQ
ENKPVTPAFLLAVMLWFPLQALAAELRKEENLPPLPALEKAMSQVITTQNQVIAIPKRYT
QIMREMWVLQFRFPKRYGGRANNLLQHPRFRAAYDFLALRALAGDESMELAQWWTTFQDV
DEQEQANMVAAIAPPPPRKPRRRKKPKAASS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacaatcattaagctaatcaaaaagctgttacgtaaaaacaggacaagacacgtt
cctgctgatgcaaactacatcattccacgcaaccgccataatttatccaagacagacata
agcgccaacgcgctaaaagttcttaaccgcctgaacggcgcgggctttgaggcgtacctg
gttggcggcagcgtacgggatcttttacttggtaaatcaccaaaggatttcgatgtggct
accaatgccacaccgaatcaaatcaaaaaattatttcgtaacgcccgtattattggccgt
cgatttaagctggttcacattattttccacagggatattgttgaagtcgcaacgttccgt
ggcaatgaaaccaacgaaatcatagacaataatcatcaaagaaacgaacaaggcatgctc
gtgcgggataacatttatggctccctggatgaagacgcgtggcggcgtgatttcactatt
aactccctctactacaacctggaagattcttccattgtggattttaccggaggtgtgaac
gacgtacggcaacgcctggtgcgtatgattggcgaaccaagtgcacgttacaaggaagat
cccgtacggatgctgcgagccattcgtttcagcgcaaaacttcattttgaactggctccg
gaaacctcggaagcaatattgaagctcaatcatttgatcagacatatttcaggatcacgc
ctctttgatgaaataacaaaaatgtatcaatgcggcgaagcagcaagcatccagcgactt
ctggtaaaatacggcctttttgcccagctttttgagcagaccgaccgattgcttgattcg
gattacccggtcaacgcgctcctgggtatcgctcttgaaaataccgatagccgtatccag
gaaaacaaaccggttactccggctttcctgcttgccgtcatgctttggttcccgctccag
gcgcttgcagccgagttacgcaaggaggagaatctaccgcccttgcccgcgcttgagaaa
gcgatgagtcaggtcatcaccactcaaaaccaggtgatagccatacccaagcgatacacc
cagattatgcgcgaaatgtgggtgttgcaatttcgttttccaaaacgttacggcggccgg
gccaataatttattgcaacacccacgatttcgcgcagcttacgattttctggccttgcgt
gccctggctggtgacgaatccatggaactcgcacaatggtggacaacttttcaagatgtc
gatgaacaagaacaggctaatatggtagcggccattgccccaccgcctccccggaaaccc
agaaggcgaaagaaaccgaaagccgcttcttcatga
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