Legionella spiritensis: NCTC12082_01941
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Entry
NCTC12082_01941 CDS
T06800
Symbol
ihfB
Name
(GenBank) integration host factor beta subunit
KO
K05788
integration host factor subunit beta
Organism
lss
Legionella spiritensis
Brite
KEGG Orthology (KO) [BR:
lss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lss03032
]
NCTC12082_01941 (ihfB)
03036 Chromosome and associated proteins [BR:
lss03036
]
NCTC12082_01941 (ihfB)
03400 DNA repair and recombination proteins [BR:
lss03400
]
NCTC12082_01941 (ihfB)
DNA replication proteins [BR:
lss03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC12082_01941 (ihfB)
Chromosome and associated proteins [BR:
lss03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NCTC12082_01941 (ihfB)
DNA repair and recombination proteins [BR:
lss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NCTC12082_01941 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DMF_alpha
Motif
Other DBs
NCBI-ProteinID:
VEG91504
LinkDB
All DBs
Position
1:2154179..2154490
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AA seq
103 aa
AA seq
DB search
MIKSQLIANLAAEMTRLPEKQVTDSVNRILELMSEALIDGKRIEIRGFGSFSLHYRPPRN
AHNPKTGEKVITEEKYSPHFKPGKELRERVDASRGKVPIKHDD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatcgcaactcattgcaaaccttgctgcagaaatgacccgtcttcctgaaaaa
caggtgaccgacagtgtgaatcggattcttgaattaatgagtgaagcgctcatcgacgga
aaacgcattgaaattcgcggatttggcagtttttcactccattatcggccacctcgcaac
gcgcacaatcctaaaaccggcgaaaaagtgataacggaagaaaaatacagcccccatttc
aagccgggtaaagaacttcgcgagcgcgtggacgcgtcacggggaaaggtaccaatcaaa
cacgatgattaa
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