Legionella spiritensis: NCTC12082_02836
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Entry
NCTC12082_02836 CDS
T06800
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lss
Legionella spiritensis
Pathway
lss03420
Nucleotide excision repair
lss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12082_02836 (uvrD)
03430 Mismatch repair
NCTC12082_02836 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lss03400
]
NCTC12082_02836 (uvrD)
Enzymes [BR:
lss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12082_02836 (uvrD)
DNA repair and recombination proteins [BR:
lss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12082_02836 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC12082_02836 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
HBB
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VEG92364
LinkDB
All DBs
Position
1:3139109..3141289
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AA seq
726 aa
AA seq
DB search
MSVTALLEGLNERQREAVVAPPGNLLVLAGAGSGKTRVLVSRIAWLIEQQHMLPQSILAV
TFTNKAAGEMKARLNSLLTTPLPGLWVGTFHGLCHRLLRRHYQDAGLPEQFHILDSDDQA
RMIKRMIAALNLDEDQWPVKQAQAFINGKKDEGLRPRHINPVQYGPTRTLINIYQAYEQA
CQTAGVIDFAELLLRTHELFRNNPEILAHYQQRFQAILVDEFQDTNTIQYAWIRLLAGQD
TAVMAVGDDDQSIYGWRGAKVENIHQFTRDFSSAKVIRLEQNYRSTATILAAANALITNN
QSRMGKELWTAGADGGKIIVYGAFNEIDEARFISERIHMAVKEGRNPDEIAVLYRSNAQS
RVLEEALLRAGIAYRIHGGVRFFERSEIKDTMAYLRLVVNPDDDTAFERIVNFPTRGIGE
KTLEEIRQLARRETYSMWQAAHTLLQEGGLPQRAASSLEKFTRLIDDLRSASEHLELDEQ
ISEVLNASGLYAHFAKVKGDKAESRLDNLQELVNAARQFRYEQDADEELPLLVAFLAHAA
LEAGDMQAQEHERYVHLMTLHAAKGLEFPLVFLAGMEEGVFPGRQSFEEPGRLEEERRLC
YVGMTRAMERLIISHAEVRRQYGREEYHKPSRFLREIPQELLDEIRVKTHFRMPDKPKQW
TTASMTAHESGLKLGQNVTHTKFGMGVVVNVEGSGAHTRVQVKFAEHGTKWLVLAYANLT
VHEDIM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaactgccttgctggaagggcttaatgaacgacaacgtgaagcagtggttgcc
ccgccgggtaacctgctcgtactcgccggagctggcagtggtaaaacccgtgtactggtc
agtcgtatcgcctggttgattgaacagcagcatatgctcccgcaatccattctggcggtg
acgtttacgaacaaagcggccggagagatgaaggcgcgtcttaacagtctgttgactacg
cctttgccgggtttatgggtgggcacctttcacggtctttgccatcgcctgttacgacgc
cattatcaggatgcgggattaccggaacaatttcatattctggacagtgacgatcaggcg
cggatgatcaaacggatgatcgcggcgttaaatctggatgaggatcaatggccggtgaaa
caggcacaggcttttattaacggtaaaaaggatgagggcttaaggcctcggcacattaat
cccgtgcagtatggaccaacacgtacactgattaacatatatcaggcttacgagcaggct
tgtcagactgccggagttattgactttgcggagttactgcttcgtacgcatgaacttttt
cgtaacaatccggaaattcttgcgcattatcaacagcgatttcaagccatcctcgttgat
gagtttcaggataccaataccattcagtatgcctggatccgtctgttggccggccaggat
actgcggttatggccgtgggcgatgatgatcaatccatttacggatggcgaggtgcgaag
gtggaaaacattcatcagtttaccagggatttcagctcggccaaggtaatccgcctcgaa
caaaattaccgttcaacagcgacgatcctcgcggcggcgaacgctttgattaccaataat
caatcaagaatgggaaaggaattatggactgccggcgcggacggggggaaaattatcgtc
tatggcgcattcaatgaaattgacgaggcgaggtttattagtgagcgtatccatatggct
gttaaagaagggcgaaatcctgatgagatagcggttttgtatcgctccaacgcccagtcc
cgggtgttggaggaagcgttgctacgagcaggcatcgcttaccggatccatgggggcgtg
cgcttttttgaacgttcggaaatcaaggatacgatggcttatctgcgtttggtggtcaat
cccgatgatgataccgcctttgagcggattgttaattttccgacacgtggcatcggagaa
aaaacactggaggaaatacggcaactggcgcgacgggaaacgtattccatgtggcaggct
gcccatacgctgcttcaagagggtggtttgccgcaacgtgcggcatccagcctggagaaa
ttcacccgtttgatcgatgacttgcgttctgcatccgaacatcttgagctggatgagcaa
atttcggaagtccttaatgccagtggcttgtatgcgcactttgccaaggtcaagggtgac
aaggccgaatcacgtctggataacctgcaggaactggtcaatgcggccaggcaatttcgc
tatgagcaggatgccgatgaggaactgccattactggtggcgtttctggcgcacgcggca
ctggaggcgggcgatatgcaggcgcaggagcacgaacgttatgttcatttgatgacgctg
catgcggcaaaaggacttgaatttcccctggtattcctggccggtatggaagaaggcgtt
tttccaggccggcaatcgttcgaggaacccgggcgtctggaggaagagcgtcgtctctgt
tatgtggggatgacacgcgccatggaacgtctgatcatttcccatgccgaggtacggcgc
cagtatggtcgggaggaataccataagccttcccgtttcctgcgggaaataccccaggaa
ttacttgatgaaatacgggtaaagactcattttcgcatgccggacaaaccgaaacaatgg
acaaccgcgtccatgactgcccatgaaagcggtttgaagctggggcaaaacgtgacccat
accaaatttggtatgggtgtcgtggttaatgtggagggtagcggcgctcatacccgggtg
caggtcaaatttgccgagcatggtacaaagtggctggtgcttgcctatgcgaatctgacc
gttcatgaggatattatgtaa
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