Leptospira santarosai: LSS_00620
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Entry
LSS_00620 CDS
T03999
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lst
Leptospira santarosai
Pathway
lst03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LSS_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lst03021
]
LSS_00620
03400 DNA repair and recombination proteins [BR:
lst03400
]
LSS_00620
Enzymes [BR:
lst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LSS_00620
Transcription machinery [BR:
lst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LSS_00620
DNA repair and recombination proteins [BR:
lst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LSS_00620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
EKT88810
UniProt:
K8YHS9
LinkDB
All DBs
Position
I:complement(3146365..3147342)
Genome browser
AA seq
325 aa
AA seq
DB search
MSLKSLLKGFKRPKKIEFNTEANTPNYGKFVAEPFERGFATTIGNSLRRTLMSSIEGAAI
SAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEEKDQSKIIHLELKGAGYFRAG
DLAVDSSIEIMNPDLHIATLNEDANLVMDLEIQRGRGYVPAEEKKKDIEVLGTIPVDSIF
SPVQKVVFEVSETRVAQRSDYEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEE
LEEDDDELDEADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKH
YSDQCLQELKAKLFTLGLSFGMRDF
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
ttgtctctcaaaagcttactcaaaggatttaaacgtcctaagaagattgaattcaacacg
gaagcgaacactcccaattacgggaagttcgttgcagagccatttgaaaggggttttgcg
acgactatcggtaactcacttagaaggactttgatgtcctcgattgagggagcggcgatt
tctgcgattcgtatcgaaggtgtaaaccacgagttttcctttatcgaaggtgttgcggaa
gacgtgacgagaatcattctgaacttaaaacaggttcgtattaaatacgaacctgaagaa
aaagatcagagtaaaatcattcatctcgaactgaaaggtgcgggttatttcagagcgggg
gatctcgctgtggattcttccatcgaaatcatgaaccccgaccttcatatcgcgactctg
aacgaagacgcaaacctcgttatggatctggaaattcagagaggaagaggatacgttccc
gctgaagaaaagaaaaaagacatcgaagtgcttggaacgattccggtggattctatcttt
tctccggttcagaaagtggtttttgaagtatccgaaacccgcgtagctcaaagatccgat
tatgaaaaactgactctggaagtttggaccgacggttccgtatctccggacgacgcggtt
gctcaagcggcgaaaattttaaaagaacatcttacggtatttatcaatttcgaagaagaa
ttggaagaagacgacgacgaactggatgaagcggatgaaaaactcaaagcttccttgtcg
aaacacgtggaagaattggaactttccgttcgttctctcaatgtgttgagaagtctggaa
atcgattttatcggagatcttgtaaaaagatccgaagaagaaatgtcgaaatccaaacac
tacagcgatcagtgtcttcaggagttgaaagcgaaacttttcactctgggtctctctttc
ggaatgagggatttttaa
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