Leptospira santarosai: LSS_05278
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Entry
LSS_05278 CDS
T03999
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lst
Leptospira santarosai
Pathway
lst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LSS_05278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lst03400
]
LSS_05278
DNA repair and recombination proteins [BR:
lst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSS_05278
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LSS_05278
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
SWI2_SNF2
AAA_16
AAA_22
Microtub_bd
AAA_33
AAA_7
TsaE
AAA
Motif
Other DBs
NCBI-ProteinID:
EKT87752
UniProt:
K8YBA8
LinkDB
All DBs
Position
I:complement(781297..783297)
Genome browser
AA seq
666 aa
AA seq
DB search
MASIFKIHSAYEPAGDQIKAIENIANSFQKGENKVTLVGVTGSGKTFTMAQVIRNLGLPT
LVLSHNKTLAAQLFREFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSINEEID
KLRLRATSSLLEREDVVIVSSVSCIYGLGSPEEYTNSVVALKVGDTIERDAVIRKLLHIQ
YNRNDIDFSRGNFRVRGDSIEIYPAYHTDGIRIEFFGDEIDSISRINPITAQTILKLEKT
YIYPAKHFITSGPKVKEAIENIKAELEAQAVFFRKNDKLLEAERIISRTNYDMEMLQEMG
YCNGIENYSRHLTGRKAGERPACLIDYFQGEFLLIVDESHVTIPQIGGMFAGDKARKQTL
VDFGFRLPSALDNRPLNFDEFETLTPKTLYVSATPADYEIKKSSKVVEQIIRPTGLLDPI
VEVRPTKNQIEDLLVEIRKRIDAGERVLVTTLTKKMSEDLADYYEEIGLKVAYLHSEVET
LDRVAIIRDLRKGIHDVLIGINLLREGLDIPEVSLVAILDADKEGFLRNYKSLIQTIGRA
ARNVNGTAILYADKITDSMAKAIDETKRRREIQENHNLKFGITPLTIKKEISDIIEREEK
ERTSEDLVLEDVEKKFNSKKFPNKEELKDKLREEMMKAAKDLDFERAAILRDKMLSIQTN
DPSAEN
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatttttaaaattcattccgcatacgaacccgccggagatcagattaaggcg
atcgaaaatattgcgaactcctttcaaaaaggggagaataaagtcacgttggtcggagta
accggatccgggaaaacgttcacaatggcacaggtgatccgaaatctcggacttccgacc
ctagttttgtcgcataacaaaactttggcggcccagctttttcgggagtttaaggaattt
tttccggaaaacgcggtggaatatttcgtttcctattacgattattatcaaccggaagcc
tacgtcccctcttcggacacattcatcgaaaaggatagttccatcaacgaagagatcgac
aaactcaggctcagagccacatcctctcttttggaaagagaggatgtcgtcattgtcagt
tcggtatcctgtatctacggtttaggctctccggaagaatatacgaattcggtagtcgct
ttaaaagtgggcgacacgatcgaaagggacgcggtaatccgtaaactgttacacatccaa
tacaatagaaacgatatagatttttccagaggaaacttcagagttcgcggagattcgatc
gaaatttatccggcgtatcacacggacggaattcgaatcgaatttttcggagacgagatc
gattcgatcagtagaatcaatccgataacggcacaaacgattcttaaattagaaaaaacg
tatatttatcccgcaaaacacttcatcacttccggtccgaaagtcaaggaggcgatcgaa
aacatcaaggcagaattggaggctcaagccgtttttttcaggaaaaacgacaaacttttg
gaggcggaaagaatcatatcccgcacgaattacgatatggaaatgcttcaggagatggga
tactgcaacgggatcgaaaattattcccgacatctcaccggtagaaaagcgggagaacgt
ccggcctgtttgatcgattattttcagggggaattccttctgatcgttgacgagtctcac
gtgacgattccccagatcggaggaatgtttgccggagacaaggcccgcaaacagacgtta
gtcgactttggttttagacttccaagcgcgctcgataataggcctcttaacttcgacgag
ttcgaaactttgactccgaaaaccctatacgtttccgcgactccggcggattacgaaatt
aaaaaaagttccaaagtcgtggaacagatcatccgaccgaccggacttttggatccgatc
gtggaagtgcgtcccactaaaaatcagatcgaagaccttcttgtggaaatccgcaaacga
atcgatgcgggcgaacgcgtccttgtcacgacactgactaaaaaaatgtcggaagatctt
gcggattattacgaagagatcggcctgaaggtcgcgtatcttcattccgaggtggaaacc
ttggatcgtgtcgctatcatccgagacttgagaaaaggtatccacgacgttttgatcgga
atcaacctactgcgggaaggtctcgatattcccgaggtttctttggtcgcgattttggac
gcggacaaagaaggatttttaagaaattataaatctctcatacagacgatcggtcgcgcc
gctagaaacgtgaacggaacggcgattctttacgccgataagatcaccgactcaatggca
aaggcgatcgatgaaacgaaacgaagaagagagattcaggaaaatcataatcttaaattc
ggaatcacccctcttacgatcaaaaaagaaatcagcgacattatcgaacgggaggaaaag
gaaagaacttcggaagatctggttcttgaggatgtggagaaaaaattcaactccaaaaaa
ttcccaaacaaggaagaactgaaggataaactccgggaagaaatgatgaaagccgctaaa
gatcttgattttgaaagagccgccattttaagagataagatgttatcgattcagacaaac
gatccttccgcggaaaactaa
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