Leptospira santarosai: LSS_07909
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Entry
LSS_07909 CDS
T03999
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lst
Leptospira santarosai
Pathway
lst03030
DNA replication
lst03430
Mismatch repair
lst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSS_07909
03430 Mismatch repair
LSS_07909
03440 Homologous recombination
LSS_07909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lst03032
]
LSS_07909
03400 DNA repair and recombination proteins [BR:
lst03400
]
LSS_07909
Enzymes [BR:
lst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSS_07909
DNA replication proteins [BR:
lst03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LSS_07909
DNA repair and recombination proteins [BR:
lst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LSS_07909
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
EKT87284
UniProt:
K8Y189
LinkDB
All DBs
Position
I:342202..345678
Genome browser
AA seq
1158 aa
AA seq
DB search
MLDGAIRIKELMQHVKENGMSSVAMTDHGNMFGAVEFYNEATKQGIKPIIGSEFYVSPNR
KQETEMVKIADGSAYHLILLAKNEEGYKNLIRLSSKSYTEGFYKKARIDYDLLDKHSEGL
VCLTACLAGEVNRKILEGKIDESFQLAGKLNEIFRKEDFYMEIQNHGIPEQMTVAKQIYD
FGKKTGIPLVVTNDSHFLKKNDQEAQDILLRIGMQKRITDPMEFGFNGEFYVKSPDEMAR
VFPEIPEAFYNTLEISNKVNLKLQFGNYLLPEFEVPEGYDADSYLEKLIWEGIERKYPNL
SPEIKDRVVFELNTIKNMKFAGYFLIVQDYINYAKRNGIPVGPGRGSAAGSIVAYALGIT
NVEPLQHNLLFERFLNPDRKDMPDIDTDFCVERREEVINYIRRRYGEEKVGQIITFNSLA
AKAALKDVARVLNLPFGEANEMTKAFPNKLGMSIAEALATSSELKNFSEKDDINHKIFAI
AQRLEGNYRQPGRHAAGVVISPYPLEEVVPLSTVAEKERPGFRSIVTQYDKNNLESIGLI
KMDILGLKNLTTLDYAIKLIERRRGVRIDLDEISYKDANTYALLRKANTLGIFQLESTGI
TDLVAKSQVNNFDEIVALIALYRPGPMGEGMLDEYLDRKSGRKQVTYPHPSCEPILKETF
GVPVYQEQVMSISRVVGGFSVGDSDVLRKAMAKKKADLMEKLKYQFVEGAVKQGIQEKVA
KDLFEQLERFGGYGFNKSHSVAYAIITYQTAYLKANYTIEYLTALLASDHGKTTDIVKYI
NNAREMGIRILNPDVSESQASFNVIDDTTIRFGLSAMKGVGEAAANSIIEARIKAGSFKT
LQDFAFNIDTRLINKKVFEALIQAGALDSFGYTRKCLFESVDSILTFAQKEQERANEGQF
SLFGEAESSFTLNLPKDALEWEIDEKLKREKMIAGLYLSGHPLDKYEKQLESLKTIPIEK
FDNLKSGSKVEVAGVISSKNIKLSKRNEEFANFKLEDRTGEIECVAFAKTYQKYKEFIKE
DQAIFIKGDLDKIEVGDTELRGQVKVNSIEILDDATIEDKLEKSLHLRLEERHAEDPELI
PKLYALLACYKGESSVYFHIVENREEKSVIRAHNTYSIQPIPELFLRLADLLGDRSVFYS
VGEQLKVINKDQVAGNVG
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggagcgatccgtatcaaagagttgatgcagcacgtaaaggaaaacggtatg
tcgtcggttgccatgaccgaccacggaaacatgtttggcgcggttgaattttacaacgaa
gcgacaaaacagggtattaaaccgataatcggcagcgagttttatgtttctccgaatcga
aagcaagaaacggagatggtaaagatcgcggacggaagcgcatatcatctgatccttctt
gcaaagaacgaagaaggttataaaaatttaatacgtctttccagtaaatcgtatacggaa
ggtttttataaaaaggcgagaatcgactacgatcttctcgataaacacagtgagggactt
gtttgtttgacggcctgtcttgcgggcgaagtcaatcgaaagattttggaaggaaagatc
gacgagtcttttcaattagccggaaagttaaacgaaatcttccgtaaagaagatttttat
atggaaatccaaaaccacggaattccggaacagatgacagtggcaaaacaaatctacgat
ttcggaaaaaaaaccggcatacctctcgtagtaacgaacgattctcattttctgaaaaaa
aacgatcaagaggctcaggatattcttcttagaatcgggatgcaaaaacgtattacggat
ccgatggaattcggttttaacggagaattctacgtaaaaagtccggacgagatggccagg
gtttttcccgaaatcccggaagcgttttacaatacattagaaattagtaataaagtgaat
ttgaaacttcaattcggaaattatctacttcccgaattcgaggttccggaaggatacgac
gccgattcttaccttgaaaaattgatctgggaagggatcgaaagaaaatatcccaatctt
tctccggaaatcaaagatagggtcgttttcgaactcaatacgattaagaatatgaaattc
gccggttatttcttaattgttcaggattatatcaattatgcgaaaagaaacggaattccc
gtaggtcccggaagaggttccgccgccggttccatcgtggcttacgcactcggaatcacg
aatgtggaacctcttcaacacaatcttctttttgaaagatttttgaatcccgatcgtaag
gacatgcccgatatcgataccgatttttgcgtggaacgacgggaagaagtcatcaattac
attcgtagaagatacggagaggaaaaagtcggccaaattatcacgttcaattctctcgcc
gcaaaagccgctctcaaagacgttgctcgcgttttaaatcttcctttcggggaagcgaat
gagatgaccaaagcgttcccgaacaaactgggaatgtccattgcggaagcgcttgcaact
tcctccgagttgaaaaatttttccgaaaaagacgatatcaaccataagatctttgcgatc
gcccaaagacttgaaggaaactatcgtcagcccggaaggcacgccgccggtgttgtgatt
tctccgtatccgttggaggaagtcgttccgctttccacggttgcggaaaaggaaagaccg
ggttttcgatccatcgtaacccaatacgataagaacaacttggaaagtataggtttgatc
aaaatggatattttgggtctgaagaacttaacgaccttggattacgcgatcaaactcatc
gaacgaagaaggggagttcgaatcgatttagacgaaatttcttacaaggacgcgaacaca
tatgcgcttcttagaaaagcgaacacgctcggtatattccagttagaatccacggggatc
accgatcttgtcgctaaaagtcaagtgaacaattttgacgagattgtcgctttgatcgca
ttgtatcgtcccggtcctatgggtgaagggatgttggacgaatatttggatcgtaaatcc
ggaaggaaacaagtcacgtatccgcatccttcttgcgagccgattctgaaagaaactttc
ggagttccggtttatcaagagcaagtgatgagtatttcccgagttgtcggaggattttcg
gtcggagattcggatgtactacgaaaggcgatggcgaaaaagaaagccgatcttatggaa
aagcttaagtatcagttcgtggaaggggccgtaaaacaaggtattcaggaaaaggttgca
aaggatctcttcgaacaattggaaagatttggcggttacggattcaacaaatctcattcg
gtggcttacgcgatcattacgtatcaaaccgcttatttaaaagcgaactatacgatcgaa
tatcttaccgcacttcttgcatcggaccacggtaagaccaccgatatcgtaaaatatatc
aataacgcgagagagatgggaattcgaattctcaatccggacgtatccgaatcacaggct
tctttcaatgtaatcgatgataccacgattcggttcggactttccgcgatgaagggcgtg
ggtgaggctgccgcaaacagtatcatcgaagcaagaattaaggcgggaagtttcaaaact
cttcaggattttgctttcaacatagatacgagattgatcaataaaaaggtttttgaagct
ctcatccaagcgggggctttggattctttcggatatacccggaaatgtcttttcgaatcc
gtggactctatactaacctttgctcaaaaggaacaggaaagagcgaacgaaggacaattc
tctctttttggggaagcggaaagttcttttacgctcaatcttccgaaggatgcgctcgaa
tgggaaatcgatgaaaaactcaaacgggagaaaatgatcgccggactttatctctccggt
cacccgcttgataaatacgaaaaacagttggaaagtttaaaaacgattccgatcgaaaaa
ttcgacaacttgaagtctggaagtaaggtggaagttgcgggtgttatctcttccaagaac
ataaaactcagcaaacgaaacgaagagtttgcgaatttcaagctcgaagatagaaccgga
gagatcgaatgtgtcgcattcgcaaagacgtatcagaaatataaggaattcataaaagag
gatcaagcgatctttatcaaaggggacttggacaaaatcgaagtgggggatacggaactc
cgcggacaagttaaagtcaacagtatcgaaattttagacgatgcgacgatcgaagataaa
ctcgaaaaatcgcttcatcttcgtttggaagaaagacacgcggaagatccggaattgatt
ccgaaattgtacgctttgcttgcctgttataagggagaatcttccgtttactttcacatc
gtggaaaatcgggaagaaaaaagtgtcattcgtgctcacaatacgtattcgatccaacca
attcccgagctctttcttcgattggcggatcttttaggggatcgttccgtcttttattcc
gtcggagaacagctcaaagtaatcaataaagatcaggttgcgggtaatgtcggttaa
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