Leuconostoc suionicum: A6B45_06955
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Entry
A6B45_06955 CDS
T05489
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lsu
Leuconostoc suionicum
Pathway
lsu03410
Base excision repair
lsu03430
Mismatch repair
lsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A6B45_06955
03430 Mismatch repair
A6B45_06955
03440 Homologous recombination
A6B45_06955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsu03400
]
A6B45_06955
DNA repair and recombination proteins [BR:
lsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A6B45_06955
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A6B45_06955
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A6B45_06955
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
ssDNA-exonuc_C
DHHA1
Motif
Other DBs
NCBI-ProteinID:
API72425
UniProt:
A0A2N9K7K4
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Position
complement(1409386..1411353)
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AA seq
655 aa
AA seq
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MNQNNWNILPQPSEKVVRQLSTQLNISQFMSTIVAQRGYTDPESAFKYLQPSVEQLHDPM
LLHDMDRTIERLQDAAFGGEKIVVYGDYDMDGVTSTAIMVEALEVLGADVTPYIPNRFSD
GYGPNIDTYKKLIADGAQLIVTVDNGVSGQEAVEYAMSQGIDVIITDHHEMPATLPNAYA
VIHPRHPEGQYPFGDLSGAGVAFKVAQALLNEGQPVEDQTELPTELLDLVALGEISDMVS
LTDENRVLVSWGLKQINVSPRPGLTAVLKNAGKKDNEPVISETVSFKIAPRLNAVGRLGD
ASLSLKLLLSQDPDESTAIASEVEAINAQRQEIVEEVFGSAKQMALSEEYKNDQVLVIAG
QDWHQGILGIVASRLVELLQKPTIVLSLTDGVYKGSGRTFGDFDLYQFMNTFHDLYDTFG
GHASALGLAIFPEQLDVLKEQVRLNSAKLQIHAKPININTTLSVNEISTETYEELRLLEP
FGTGNQQPVFGLQQPKINKVTTMGNLKQHIKLALENNVEAVGFNHPDWVPMVANPVGLSF
AATLGINYFRGRKTIQLLLTAINTPEATAENAAHKKFFAQVYKFIYAHQDLNFAQNLDKI
AEQLNINKNDLNIMIQVFIELGFVHVTNGFVTIISGAAQKPLTTSITYQKYLANR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaataattggaacattctgccacaaccaagtgaaaaggttgttcggcagtta
agcacacaactaaatattagtcaatttatgtcaacaattgtggctcaaaggggttataca
gatccagaatcagcttttaaatatttacaaccaagtgtagaacaattgcacgatcccatg
ttacttcatgatatggatagaaccattgagcgtctgcaggacgcagcttttggtggtgaa
aagattgttgtgtacggtgactatgatatggatggtgtcactagtacagcaattatggtt
gaagccttagaagtattgggggcagatgtaacaccctacatacctaatcgcttttcagat
ggctatgggccaaatattgatacgtataaaaaacttattgctgatggtgcacaattgatt
gtgacagtagataatggtgttagtggtcaagaagctgttgaatatgcgatgagccaaggt
attgatgtcattattactgatcaccacgaaatgcccgccacattgccaaacgcttatgcc
gttattcacccaagacatccagaaggccagtatccatttggtgatttatctggcgccggt
gttgctttcaaagttgctcaagcattattaaatgagggccaaccagttgaggatcaaaca
gagctaccaactgagctgttggatctcgttgcgctaggtgaaatttctgatatggtgtct
ttgaccgacgaaaacagggttttagtctcatggggattgaaacaaattaatgtttcgcca
cgtccaggtctaactgcagtgttgaaaaatgcgggcaagaaagataatgaaccagttatt
tcagaaaccgtttcatttaagattgctcctcgtttaaatgctgttggtcgtttaggggat
gctagcttatctctaaaacttttgttaagtcaagatccagacgaatcaactgctattgct
tctgaagttgaggctattaatgcgcaacgtcaggaaattgttgaagaggtatttggttct
gcaaaacaaatggctttgtcagaagaatacaaaaatgatcaagtcttggttatcgctggt
caagattggcatcaaggtattttgggtattgtggctagtcgattggtggaactattacaa
aagccgacaattgttttaagtttaacggatggtgtttataaaggatctggtcgcactttt
ggtgattttgatctctatcaatttatgaatacctttcacgatttatatgatacgtttggt
gggcatgccagtgcattaggattagctattttcccagagcaactagatgtattgaaagag
caagttcgtttgaactcagctaaattacaaattcatgccaagccaattaatattaatacg
acactgtcggttaatgagatcagcactgaaacgtatgaagaactacgcctgcttgaacct
ttcggtactggaaatcagcagccagtgtttggattgcagcaaccaaagattaataaagta
acaaccatgggaaacttaaagcaacatattaagttagctttagaaaataatgttgaagcg
gttggctttaaccatccagattgggtgcctatggttgctaatcctgtagggctatcattt
gctgcgactcttggcattaattatttccgtgggcgcaaaacaatacagcttctactaact
gctattaatacaccagaggcaactgctgaaaatgctgctcataaaaagttttttgctcaa
gtatataaattcatttacgcacatcaggatttaaattttgcgcagaacttggataaaata
gcggagcagttaaatatcaataagaacgatttgaacattatgattcaagtatttattgaa
ttaggtttcgtgcatgttactaatggatttgttacaattatttcgggagcagcacaaaaa
cccttaaccacgtcaataacataccaaaagtatttggcaaatcgttaa
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