Lactuca sativa (garden lettuce): 111875950
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Entry
111875950 CDS
T05352
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00240
Pyrimidine metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
111875950
Enzymes [BR:
lsv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
111875950
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
111875950
NCBI-ProteinID:
XP_023728243
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Position
2:68449839..68461299
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AA seq
359 aa
AA seq
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MSSRTNAISRITNLRRHFNISKQGSKGGNEGNSYENTSSGSIKISQDVSTALSNGKAVVA
LESTIITHGMPYPQNFETAKEVEAIVRENGAVPATIAILDGIPCIGLTTEELERLAKLGT
KARKISRRDIAYVVATRGSGGTTVSATMIFASMVGISVFVTGGIGGVHRNGENTLDISSD
LTELGRTPICVVSAGVKSILDIPKTLEYLETQGVCVAAYKTDDFPAFYSEKSGCKAPCQV
DTPEECARLIEANRRLDLRTGILIGIPIPKQHSVTGNVIDSAIQTALREASEKGIKGSAE
TPYLLSRVNELTGGSSLESNIALVKNNAVLGAQIAASLAQIQDNDQQKDKGSKSEANDS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacgaactaacgctatctcaaggataaccaacctccgtcgtcatttcaacata
tcaaaacaaggctccaagggtggcaatgaggggaatagctatgaaaataccagttcgggg
agtattaagatttctcaagatgtttcgacagctttatcaaatgggaaagcagttgttgct
ctggagtccactataataactcatggcatgccatatcctcaaaattttgagactgcaaaa
gaagtggaagccattgtgagggaaaatggagctgttcctgctaccattgctattttggat
ggcataccatgcatagggcttaccactgaagaactggagaggttagctaagttaggaact
aaggctcgaaaaatatctcgaagagacattgcatatgttgtggccacaagaggtagtggt
ggaacaaccgtgtctgcaaccatgatctttgcatcaatggttggcatttctgtatttgtt
acagggggtattggaggagttcacagaaatggagaaaacacactggatatatcatctgat
ctaacggagcttggaagaactccaatatgtgtagtatcagctggagttaagtctatatta
gacattcccaaaaccctagaatatttggaaactcaaggagtttgtgttgctgcttacaaa
accgatgactttcctgctttttatagcgaaaaaagtggctgcaaggcaccatgccaagta
gatacaccggaagaatgtgctcgactcattgaggccaacaggagacttgatcttagaaca
ggcatcttgataggaattcctattccaaaacaacattctgttactggtaatgtcatagac
tctgctatacaaacagcactcagagaagctagtgagaagggtataaaaggaagtgcagaa
actccttatctactttctagagtgaatgaattaacaggaggatcttctctcgagtcaaac
attgctctagtgaagaacaatgcagttcttggtgctcaaatagctgcttcccttgctcaa
atacaagacaatgatcagcagaaagataaaggatcaaaatcggaagcaaatgactcgtga
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