Lactuca sativa (garden lettuce): 111876019
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Entry
111876019 CDS
T05352
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111876019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111876019
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111876019
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
111876019
NCBI-ProteinID:
XP_023728303
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All DBs
Position
3:319356193..319360909
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AA seq
722 aa
AA seq
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MKFKHERYTRFKGISSDQSYSSDQQNPRKYGLKPYLRSVVDKIQRGFNQASRGVGGLKNS
LIFPESSSDKPTKQVVLISKKKKKILDPQGSFLQKWNKIFVLLSIIAVSLDPLFFYIPVI
DGDQKCIGMDNNMKIISCVLRTLIDIIYILHIIFKFRTGFIAPPSRIFGRGELIEDSYAI
AKHYFCSYFIVDVLAILPLPQVTILFIIPMSNGPVSLVTKDLIKFVIFAQYIPRLLRIFP
LYREVTRTSGIFTETPWAGAAFNLLIYMLGSHIIGSFWYLFAIEREDDCWRNACNKNNNC
DAKYLYCDEKREGDYSWLNTSCIMLQPDQIKNSSDFDFGIFLDAFESHIVETKDFPQKFL
YCFWWGLRSLSSLGQNLKTSTYEWEILFAVLISVLGLVLFSFLIGNMQKYLQSITVRVEE
MRVKRRDAELWMSHRMLPDELKSRVRRYEQYKWQENRGVDEESLIHNLPKDLRRDIKRHL
CLSLLMRVPMFEIMDERLLDAMCDCLKPVLYTENSCIVREGDPVDEMLFVMRGELLTMTT
NGGRTGFFNSSYLKAGDFCGDELLTWALDPNLSSTLPLSTRTVKPLTDVEAFALKAEHLR
FVASQFRRMHSRRFQHTFRYYSQQWRTWGACFIQVAWRRHCRRKQEAALWEEERRLQEAL
AKGGETASPSLGAAIYASRFAANILRNLRRNPSHGTKLMAPVVPTLLPQKPVEPSFSDDD
LE
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaaacatgaaagatacacaaggtttaagggtattagttcggatcaatcttac
agttctgatcaacaaaacccaagaaaatatggactaaagccatatttgaggtcagtggta
gataagattcaaagaggattcaatcaagcttctagaggtgttggtggattaaagaattcg
ctaatctttcctgaatcatcgagtgataaaccaacaaaacaagtagttttaatttcgaag
aagaaaaagaaaatcctagatccacaaggatcttttcttcaaaagtggaataagatattt
gtactccttagcattattgcggtatctttagatcctctgtttttctacattcctgttatc
gatggtgatcaaaagtgcattggtatggacaacaatatgaagatcatttcgtgtgttctt
cgcactttgattgacataatttacattctccatataatcttcaagtttcgcaccggattt
attgctcctccttctagaatctttggaagaggtgaattaatcgaggactcttatgctata
gcaaaacactacttctgctcctacttcattgtagacgtcttggcaattcttccccttccc
caggtgacgattttgttcatcataccaatgagcaatggaccggtttcattagttacaaag
gatttgataaagtttgtgatatttgcacaatacatcccacgtttgcttcgtatctttcca
ctatatagagaagtgacaagaacttctggcatatttacggaaacgccctgggccggagct
gcttttaatctcttaatctacatgctaggaagtcatataattggatccttctggtactta
tttgctatagaaagggaagatgattgctggcgtaatgcatgcaataaaaacaacaattgt
gatgccaagtatttatactgtgatgaaaagcgtgagggggattattcatggctaaatact
tcatgcataatgcttcaacccgatcaaatcaaaaattcatcagattttgatttcggtata
ttccttgatgcttttgaatctcacattgtggaaactaaagatttcccacaaaaattcttg
tactgcttttggtggggtttgagaagtttaagctctcttggtcaaaacctcaagacaagt
acctacgaatgggagatcctatttgctgtcttgatttcggtgcttggattggtcttgttt
tcatttctcatcggaaacatgcagaaatatcttcaatcgatcactgtgagagtagaagaa
atgagggtgaaaagaagagacgcggagttatggatgtcccaccgcatgcttcctgatgaa
ctaaaatcccgtgtgaggcgttacgagcaatacaaatggcaggaaaacagaggagtcgat
gaagagtcgctcattcacaatctaccaaaggatttaagaagagacataaaacgtcatctt
tgcttgtccctactcatgagagtgccaatgtttgaaataatggatgaaagactgttggat
gcaatgtgcgactgtttgaaaccggttctttacacggaaaacagttgcatagttcgtgag
ggggatccggtggatgagatgttgtttgtgatgcgaggggagttgttgacaatgacaaca
aatggtggaagaactggtttttttaattcaagttatttaaaagccggtgatttttgtgga
gatgaattgctgacgtgggctttggatcccaatttgtcttcaactcttcccctttcaaca
agaactgttaaaccgcttacagatgttgaagcttttgctttgaaggctgaacatctcaga
tttgttgcttcgcaatttaggcgtatgcatagcaggcgcttccaacatactttcaggtac
tactcacaacaatggaggacatggggggcttgttttatacaagttgcatggcgcagacac
tgtagaaggaaacaagaagcagctttatgggaagaagaaagaagactgcaagaagcatta
gcaaagggtggtgaaaccgcctccccaagtcttggagccgccatttatgcttctaggttt
gccgccaatattttacgtaatttaaggaggaacccttcacatgggacaaaattaatggca
cctgtggttcccacattgcttccacaaaagccggtggagccttcttttagtgatgatgat
cttgaataa
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