Lactuca sativa (garden lettuce): 111876117
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Entry
111876117 CDS
T05352
Name
(RefSeq) KH domain-containing protein At3g08620
KO
K14945
protein quaking
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111876117
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111876117
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
111876117
NCBI-ProteinID:
XP_023728416
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All DBs
Position
9:complement(45571110..45573311)
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AA seq
275 aa
AA seq
DB search
MSSGLYNHNYSPARAVSPQIRTNGDADSQYLSELLAEHQKLQPFTQVLPVCTRLLSQELM
RVSSMLQNQGYNELERMRHRSPSPMASSDLMSQIPGGWNGFPQERLSGMTMDWQGTPASP
SSYTVKRILRLDIPVDTFPNFNFVGRLLGPRGNSLKRIEATTGCRVYIRGKGSIKDPDKE
EKLRGRPGYEHLNEQLHILIEADLPPSVVDLRLRQAQEIIQELLKPVDESEDYIKRQQLR
ELAMLNSSLREESPGPSGSMSPFNTSGMKRAKTGR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaggtttgtataatcacaactattctccagcaagagctgtatctcctcagatt
agaactaacggagatgctgatagtcagtacttgtctgaattattggcggaacatcagaag
cttcagccgtttactcaagttcttcccgtatgcaccagactcctgagtcaagaattaatg
agggtttctagtatgttacaaaaccaagggtataatgagcttgaaagaatgcgacataga
agcccaagccccatggcttcttcagatctcatgtcgcaaattccaggtggttggaatggt
tttccacaggagaggttaagtggaatgacaatggattggcaaggaactccagcaagccct
agttcatacacagtgaagcgaatcttgaggttggatattcccgttgataccttcccaaat
tttaactttgttggcagacttttgggacctcgaggcaattcactaaaacgtatagaggct
acaacagggtgtcgtgtgtatataagaggaaaagggtcaatcaaagatcctgataaggaa
gagaaactgaggggaagacctggatatgaacatttaaatgagcaacttcacatcttgatt
gaggctgatttgccaccaagtgttgttgatttaaggctaaggcaagctcaggaaataatc
caggagttgctaaaaccagtggatgaatcagaagattacatcaaaagacaacaattaaga
gagctagcgatgctaaattcgagtttgagagaagagagtcctggaccaagtggaagcatg
tcaccattcaatacaagtggcatgaaacgtgcaaaaactggacgttag
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