Lactuca sativa (garden lettuce): 111876355
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Entry
111876355 CDS
T05352
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111876355
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111876355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
111876355
NCBI-ProteinID:
XP_023728648
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All DBs
Position
8:complement(7461876..7465743)
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AA seq
468 aa
AA seq
DB search
MASVSSQPQFRYTQTPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFAEQNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTSADVAGNVLLVTIEGN
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFTDSETATSAKDALDGRSIPRYL
IPELGPCSLKITYSAHTDLSVKFQSHRSRDYTNPMLPVASSAIDATGQFSLGLDGKKIES
ESNVLLASIENMQYAVTLDVLHMVFSAFGPVLKIAMFDKNGGVQALIQYPDVQTAIVAKE
ALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTVPAGAQMMNSQPSILGQQPPSG
PPQYGGGGAQYIPAPEGYAAAPAPQSSGGWAPGAPAGPQSMPMHMQQQQHQHPQQQQQQQ
MHNHPYMPHHQQQQHQGMPSEMGHGPGHYNGQNGYPPQGGPPPPRYHQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgtctccagtcagcctcagttccggtacacacagaccccatccaaggttctc
catttgagaaacttgccatgggagtgcactgaagaggaactaattgaacttgggaagcct
tttggtaaagttgtgaacacaaagtgtaatgttggagcaaacaggaatcaagccttcatt
gaatttgctgaacaaaatcaagctatagcaatgatatcatattatgcttcatcatcagaa
ccagctcaggtgcgagggaaaactgtctacctacagtattccaacaggcaagaaattgtg
aacaacaaaacctctgcagatgttgctggaaatgtacttctggtaaccatagagggcaat
gatgctcgccttgtcagcattgatgtcttacacctggtgttttctgcgtttggttttgtg
cataaaatcacaacttttgagaagacagctggatttcaggcccttgtgcagtttacagat
tcagaaactgctacttctgcaaaggatgctcttgatggaagaagtattcccaggtatttg
atcccagagcttggaccatgttctcttaagataacatattctgcacatacagatttgagt
gtaaaattccagagtcatcgtagcagggactatacaaatcctatgcttcctgttgcatct
tcagcaatagatgctactggtcagttcagtttaggtttagatggaaagaagattgaatca
gagagtaatgttcttcttgcttctattgaaaacatgcagtatgcagtcaccttggatgtt
ttacacatggtattttctgcttttgggcctgttttaaagatagccatgtttgacaaaaat
ggtggagttcaagctctaattcaataccctgatgttcagacagctattgtagccaaggaa
gcattggaaggacactgtatatatgatggagggttttgcaagcttcacatctcttattct
cgacacactgatctaagcatcaaggtgaacaatgaccgcagtagagattacacagtgcca
gctggcgcacagatgatgaattcacaaccgtccatcttggggcaacaaccaccatcaggg
ccgccacaatacggcggtggtggtgcacagtacatccctgcaccagaagggtatgcagca
gcaccagcacctcagtcgtcaggagggtgggccccgggtgcgccagctgggccccagtca
atgccaatgcatatgcagcagcagcaacatcaacatccgcaacagcaacaacagcagcag
atgcataatcatccttacatgccacatcatcagcagcagcagcatcaaggcatgccatct
gaaatgggtcatgggccgggtcactataacgggcagaatgggtatccaccacaaggtggg
ccaccgccaccacgttaccatcaatag
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