KEGG   Lactuca sativa (garden lettuce): 111876380
Entry
111876380         CDS       T05352                                 
Name
(RefSeq) LEC14B homolog
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsv04121]
    111876380
Ubiquitin system [BR:lsv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111876380
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR75_1st WDR54 Cytochrom_D1 PROPPIN Beta-prop_SCAP Beta-prop_EDC4L Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 111876380
NCBI-ProteinID: XP_023728660
LinkDB
Position
3:36812143..36815124
AA seq 457 aa
MSRSRKSIRQCGRDGGSGIGGIAASDEGLPEIGVVTKLKSKPHQFYSRILPRKSEGMPIS
PVKMLAGREGNYSGRSRFTSADRCHLSSRYLPVNGPSVIDRMTSCAYVSQFSADGTLFVA
GFQDSDIKIYNVDNGWKVKKNIRARSLRWTITDTSLSPDQRFLVYSSMSPIVHIVNIGSA
MTESVANVTEIHEGLDFSGHDDDEEDDYSFGIFSVKFSTDGRELVAASSDDSIYVYDLAA
NKLNVRIPAHRSDVNAVCFADEAGHVLYSGSDDHLCKVWDRRCLGTRGIESGVLTGHLEG
ITFIDSHGDGHYLISNGKDQAIKLWDIRKMSSNARSNISIAPPRHIEWDYRWMEYPSHLR
NRKHPNDLSVCTYRGHRVLRTLIRCYFSPSYSTGQKYIYTGSADAHIYIYDMVSGAQVAR
LEYHDQIVRDCSWHPFDPMIGSSSWDGVIASWELKRN
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgagtaggtccagaaagtcaattcgtcagtgcggccgggatggtggtagtgggataggc
ggtattgccgcctctgatgaagggttaccggagattggagtggttacgaagcttaagtca
aaaccccatcagttctatagccgaatattgcccagaaagtcagaaggaatgcctatttcc
ccagttaaaatgttggcaggtcgagagggtaattactccgggagaagtagattcacgtct
gcagatcgttgtcacctctcgagcagatatttgccagttaatggtccttctgtgatcgat
agaatgacaagttgtgcttatgtctcacagttttcagcagatgggactctttttgttgca
ggatttcaggatagtgatattaagatatataatgttgacaatggttggaaagttaaaaaa
aacatccgtgccagaagcttaaggtggacaataacagatacatctctttcacctgaccaa
cgttttcttgtttattccagtatgtcccctattgtccatattgtgaacattggatcagct
atgaccgagtctgttgcaaatgtgactgagatacatgaaggtctggatttttctggtcat
gatgatgatgaggaagatgattactcatttgggattttctctgtaaaattttcaactgat
gggcgagaacttgtagctgcaagtagtgatgattcaatatatgtttatgatcttgcagcc
aacaagttaaatgttcgcataccagcacacaggtctgatgttaatgctgtttgctttgct
gatgaagctggtcatgtgttatattctgggagtgatgatcacctttgtaaggtatgggat
agaagatgccttgggacaagaggaatagaatctggtgttctgactggacatcttgaaggc
attacattcattgatagtcatggagatggtcattatttgatttcaaatggaaaagatcag
gctattaaactctgggatattaggaaaatgtcctcaaatgcacgcagcaatattagtata
gcccctcctagacacattgaatgggattatagatggatggaatacccatcacatttaaga
aacagaaaacatccaaatgatttatcagtgtgtacatatagaggtcacagagtcttgcga
acactcatacgatgctacttctcaccatcatacagcactgggcaaaagtacatatacact
ggatctgctgatgcccacatttatatttatgatatggtgagtggagctcaggtagcaagg
ctggaataccatgaccaaattgtaagagattgcagttggcatccatttgatccgatgatt
ggcagctcatcatgggatggggtcattgccagctgggaattgaagcggaattga

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