Lactuca sativa (garden lettuce): 111876380
Help
Entry
111876380 CDS
T05352
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsv04121
]
111876380
Ubiquitin system [BR:
lsv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111876380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR54
Cytochrom_D1
PROPPIN
Beta-prop_SCAP
Beta-prop_EDC4L
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
111876380
NCBI-ProteinID:
XP_023728660
LinkDB
All DBs
Position
3:36812143..36815124
Genome browser
AA seq
457 aa
AA seq
DB search
MSRSRKSIRQCGRDGGSGIGGIAASDEGLPEIGVVTKLKSKPHQFYSRILPRKSEGMPIS
PVKMLAGREGNYSGRSRFTSADRCHLSSRYLPVNGPSVIDRMTSCAYVSQFSADGTLFVA
GFQDSDIKIYNVDNGWKVKKNIRARSLRWTITDTSLSPDQRFLVYSSMSPIVHIVNIGSA
MTESVANVTEIHEGLDFSGHDDDEEDDYSFGIFSVKFSTDGRELVAASSDDSIYVYDLAA
NKLNVRIPAHRSDVNAVCFADEAGHVLYSGSDDHLCKVWDRRCLGTRGIESGVLTGHLEG
ITFIDSHGDGHYLISNGKDQAIKLWDIRKMSSNARSNISIAPPRHIEWDYRWMEYPSHLR
NRKHPNDLSVCTYRGHRVLRTLIRCYFSPSYSTGQKYIYTGSADAHIYIYDMVSGAQVAR
LEYHDQIVRDCSWHPFDPMIGSSSWDGVIASWELKRN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggtccagaaagtcaattcgtcagtgcggccgggatggtggtagtgggataggc
ggtattgccgcctctgatgaagggttaccggagattggagtggttacgaagcttaagtca
aaaccccatcagttctatagccgaatattgcccagaaagtcagaaggaatgcctatttcc
ccagttaaaatgttggcaggtcgagagggtaattactccgggagaagtagattcacgtct
gcagatcgttgtcacctctcgagcagatatttgccagttaatggtccttctgtgatcgat
agaatgacaagttgtgcttatgtctcacagttttcagcagatgggactctttttgttgca
ggatttcaggatagtgatattaagatatataatgttgacaatggttggaaagttaaaaaa
aacatccgtgccagaagcttaaggtggacaataacagatacatctctttcacctgaccaa
cgttttcttgtttattccagtatgtcccctattgtccatattgtgaacattggatcagct
atgaccgagtctgttgcaaatgtgactgagatacatgaaggtctggatttttctggtcat
gatgatgatgaggaagatgattactcatttgggattttctctgtaaaattttcaactgat
gggcgagaacttgtagctgcaagtagtgatgattcaatatatgtttatgatcttgcagcc
aacaagttaaatgttcgcataccagcacacaggtctgatgttaatgctgtttgctttgct
gatgaagctggtcatgtgttatattctgggagtgatgatcacctttgtaaggtatgggat
agaagatgccttgggacaagaggaatagaatctggtgttctgactggacatcttgaaggc
attacattcattgatagtcatggagatggtcattatttgatttcaaatggaaaagatcag
gctattaaactctgggatattaggaaaatgtcctcaaatgcacgcagcaatattagtata
gcccctcctagacacattgaatgggattatagatggatggaatacccatcacatttaaga
aacagaaaacatccaaatgatttatcagtgtgtacatatagaggtcacagagtcttgcga
acactcatacgatgctacttctcaccatcatacagcactgggcaaaagtacatatacact
ggatctgctgatgcccacatttatatttatgatatggtgagtggagctcaggtagcaagg
ctggaataccatgaccaaattgtaagagattgcagttggcatccatttgatccgatgatt
ggcagctcatcatgggatggggtcattgccagctgggaattgaagcggaattga
DBGET
integrated database retrieval system