KEGG   Lactuca sativa (garden lettuce): 111876446
Entry
111876446         CDS       T05352                                 
Name
(RefSeq) DNA repair protein UVH3
  KO
K10846  DNA excision repair protein ERCC-5
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    111876446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111876446
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111876446
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM Flagellin_C
Other DBs
NCBI-GeneID: 111876446
NCBI-ProteinID: XP_023728741
LinkDB
Position
2:complement(185236497..185242172)
AA seq 1399 aa
MGVHGLWDLLSPVGRRVSVETLAGKRLAIDASIWMIQFMKAMRDERGEMVRNAHILGFFR
RICKLLFLRTKPVFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNHLKAMRLK
ELANDLENQRKSNGDKGKGVITDKADLAGTTSKTNPPNTKGFDQEALDAMLAASIEAEEN
GGIIGDASTSGAGVLAEDEDEDEDDDEEMLLPTLHGKVDPAVLASLPPSMQLDLLGQMRE
RLMAENRQKYQKVKKAPARFSELQIESYLKTVAFRREIHEVQKAAGGTGIGGVQTSRIAS
EANREFIFSSSFTGDRQSLASVGVEANSNVKSQMSTQHSSTGSVNGVESTNKSNSTIESF
INEPRKRFSEDVETYRDDRGRIRVSKVRAMGIRMTRDLQRNLDLIKEIEHDKTKPVGMFN
DRITHCKETEFPSELLEISNLSSPSYQDPLVFPNKTNLETVPVSGTSLEVSFEYDKEQQF
VDSDDDVFASIVADNTSSAKQPVITLSDGEWEEGMPGNSKGEKPADCCGDESEVEWEEGP
SGNFELGSVCEVEHKETEVEWEEGPSGNFELGSVCEVEQKETEVEWEEGPSGNFALDSIC
EVEHKEAVSKGELLEEADFQEAIKRSMDDMRCAKDIDTSSSSPEEFQDDKAIDANDSPTA
QLEATTVNDPNMIEVQMTTKCLPEVSNKDASDDCNFQGETGRVDLVNPTEESGVELGNEQ
HEDNSREDDDVIIVDGQQHEVKALVIDQILETTRPEATSVKESKSDFDIVQKVPEGRDRN
ASYEERNDDVSNFVLSDMSKEQIEITKANLEEEMTNLTKERTDLGDEQRRLERNAESVSG
EMFTECQELLQMFGLPYIIAPMEAEAQCAYMELENLVDGVVTDDSDVLLFGARSVYKNIF
DDRKYVETYFMKDIETELGLPREKLIRMAMLLGSDYTEGISGIGIVNAVEVLNAFPEEDG
LHKFREWIESPDPSILGKVGGKEGSNKRAKRSNSNAGEASTADQNVSKPDDDMDMMKQIF
MEKHRNVSKNWHIPSTFPSDAVISAYASPQVDKSTEPFSWGKPDLFVLRKLCFEKFGWGT
QKADELLQPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRISKAVKGIAGSKASKLIDEN
EEDKPNRKKRKKVKLEEGKNDIETEQLIIQEEHRKNIKGSGVRGRGRGRGRSQSVRTNEN
NLELSATSSDDGNNTNSDYMQETHGEHSKGQHEIRRSKRVRKSVIPMNNEDSEMDEPRTQ
EDVGNVEPSKEEETLFNTAAIDSGGNNDHEFTLSEIRVHLDEAENWCQNDENPPEAELSN
EYLKMGGGFCLDEDEGDKEPGESACSPTQVLNEPSHEGGAEASISQNVSQVNLEEDEDEM
RPVSFLSGIPNLRRKRKKV
NT seq 4200 nt   +upstreamnt  +downstreamnt
atgggtgttcacggtctttgggatctgttatctcccgttggtcgtcgtgtctcagttgaa
accctcgccggcaaaagactcgcgattgatgcgagcatatggatgatacagttcatgaag
gcgatgcgagatgaacgcggagagatggtgaggaatgcacatatattagggtttttccga
cgaatttgcaagctattgtttctacggaccaaaccagtctttgtttttgatggtgccacg
cctgctttaaaacggagaaccgtaattgcacgtcgccgtcagcgtgagaatgctcaaact
aaaatccgaaaaactgctgaaaagttgcttcttaatcatctcaaggcaatgcggctgaaa
gaactggcaaatgatttggagaaccagagaaaaagtaacggggataagggcaaaggggtg
atcacagacaaagctgaccttgctgggactacttcaaaaacgaatccaccaaatacaaaa
ggttttgatcaagaagctttagatgctatgttggcagcatccattgaggcggaggaaaac
ggaggtatcataggtgatgcatcaacatctggtgctggggttcttgcagaagatgaagat
gaagatgaagatgatgatgaagaaatgttacttccaacacttcatggaaaagttgatcct
gctgttttagcttctctaccaccatctatgcaacttgatcttcttggtcaaatgagagag
aggttgatggcagaaaacagacagaagtatcaaaaagtcaagaaagcccctgcaagattt
tccgaattgcaaatagagtcttatcttaaaacagttgccttccgtagggagatacatgaa
gtccagaaagcagctggtgggacaggaattggtggagttcagacttcacgaatagcatcc
gaagcaaatagagaatttatattttcatcttcttttactggggataggcaatctcttgca
tctgttggagtggaggcaaacagcaatgtgaaaagccagatgtcaacacagcattcgtct
acaggttctgtgaatggtgttgagtcaactaataagtcaaacagcacaatcgagtctttc
attaatgaacccagaaagagatttagtgaagatgttgagacatatagagatgatagggga
cggatacgggttagcaaggtgagagctatgggaattcgtatgactcgtgatctacaaagg
aacttggatctaataaaagagattgaacatgataaaactaaaccagttggaatgtttaat
gacagaattacccattgtaaagaaacagaattcccaagtgaacttcttgaaatttccaac
ctttccagtccttcgtatcaggatccacttgttttccccaacaaaacaaacttggaaact
gtcccagttagtggaacttcattagaggtgtcttttgagtatgataaagagcagcaattt
gtagacagtgatgatgatgtatttgctagtattgtggctgataatacatcttcagcaaag
caacctgttataaccctttcagatggtgaatgggaagagggaatgcctggaaactctaaa
ggagagaaacctgctgattgttgtggtgatgaaagtgaagtggaatgggaggaagggcct
tctggtaattttgagttgggctctgtatgtgaagttgaacacaaggaaactgaagtagaa
tgggaggaaggaccttctggtaattttgagttgggttctgtatgtgaagttgaacaaaag
gaaactgaagtagaatgggaggaaggaccttctggtaattttgcgttggactccatatgt
gaagttgaacacaaggaagctgtttcaaagggtgagttactggaggaagcagattttcag
gaagcaattaaacggagtatggatgatatgaggtgtgcgaaagacattgatacatcatca
tcatcacctgaagagtttcaagatgacaaagcaatagatgccaatgattctcccactgca
cagttggaggcaactaccgtaaatgatccaaatatgattgaagttcagatgacaacaaaa
tgtctccctgaagtttccaataaagatgcgagtgatgactgtaattttcaaggagaaact
ggacgtgtggatctggtgaatccaaccgaagaaagtggagttgaattgggtaatgagcag
catgaggataattctagagaggatgatgatgtcattatcgttgatggtcaacaacatgaa
gtcaaagctcttgtcattgaccaaattctggagacaacaaggcctgaagcaacttctgtt
aaggaatcaaagtctgactttgatattgtgcagaaggttcccgagggaagggataggaat
gcttcttatgaggaaaggaatgatgatgtcagcaattttgttttgagtgacatgagcaag
gaacagattgaaatcacaaaggctaatttggaggaggaaatgacaaatttaaccaaggag
cgtacagatctgggtgatgaacagagaaggcttgagcgcaatgcagagtctgtgagtggc
gaaatgtttacagaatgccaggaacttcttcaaatgtttggtttgccatatatcatagct
ccaatggaggctgaagctcaatgtgcatacatggaactcgaaaaccttgttgatggtgtg
gttactgatgactctgatgttttattgtttggggcacgaagtgtttacaaaaacatattt
gatgatagaaaatatgtggagacatactttatgaaggacattgaaacagagcttggctta
ccacgagaaaagttaatccgcatggcaatgctccttgggagtgattacacagaaggtatc
agtggaattggaattgtcaatgccgttgaagtcctgaatgcttttcctgaggaagatggt
cttcataagtttcgtgagtggatagaatcaccagatccaagcatccttgggaaggttggt
ggtaaagaagggtcgaataaaagggcgaaacggtcaaatagtaatgctggagaagcttct
acagcggatcaaaatgtttcaaagccagatgatgacatggacatgatgaagcagatcttc
atggaaaagcatagaaacgtgagcaaaaactggcatattccttctacttttccaagtgat
gcagtgatttctgcatatgcatctccgcaagtagacaaatcaacagagcccttttcatgg
ggaaagccggatctttttgttcttcgcaaattatgttttgaaaagtttggatggggtacc
cagaaggctgatgagttgctacaacctgttctaaaggagtacaacaaacacgagactcag
ttgcgattggaagcattttacactttcaatgagagatttgcaaaaattcgtagcaagagg
ataagtaaagctgtgaagggaatagcagggagcaaagcatcaaagttgatagatgaaaat
gaggaagataaacccaatagaaagaagagaaagaaagtgaagcttgaagagggtaagaat
gatatagaaacagaacagcttataattcaagaggaacacagaaagaacatcaaaggttca
ggtgttagaggtagaggtagaggaagaggaagaagtcaatcagtaaggacaaatgaaaac
aatttggaactttctgcaacaagttctgatgatggaaacaatactaatagtgactacatg
caagaaacacatggtgaacattcaaaaggacagcatgaaatacgaaggtcaaaacgtgtt
aggaagtcagtgatacccatgaacaatgaagactctgaaatggatgagcctagaacacaa
gaagatgttggaaatgtagaaccttcaaaggaggaagagacactgttcaatactgcagct
atagattcaggtgggaataatgatcacgaattcacattatcagaaatcagggtccatctt
gatgaggctgaaaattggtgtcaaaatgacgaaaacccccctgaagcggaattatctaat
gagtaccttaaaatggggggtgggttttgcttggatgaggacgagggagataaggagcct
ggagaatctgcttgcagcccaactcaagtattgaatgaaccatctcatgaaggaggggca
gaagcgtccattagccaaaatgtgtcacaggtgaaccttgaagaagatgaagatgagatg
agacctgtaagtttcttatctggtattcctaacttgaggagaaagagaaagaaagtatga

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