Lactuca sativa (garden lettuce): 111876728
Help
Entry
111876728 CDS
T05352
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111876728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsv03032
]
111876728
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111876728
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
111876728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
111876728
NCBI-ProteinID:
XP_023729071
LinkDB
All DBs
Position
2:complement(178720032..178727212)
Genome browser
AA seq
1509 aa
AA seq
DB search
MEDDQRRQRRKTRGMQSEERAEALRKLKIRRQGGGADIGEERYKIKIDEPIYDTVDDDEY
ENLVAQRREDFKGFIVDDDGLGYGDEGEEVDWTKSGVIPSSEEESEGELEKKKPKKKTEK
KEHKKPSFEAAAALMGKQRISNLFTSAVFNKSKPSVASSDSVLDDVLAEFAPDENDKEKR
RRGNKRSSQNGTVLAPAALITSIKTENTPASVVAVNTLSSNSLYKHDVIEEGKEVLEFPK
NETDLGVVEEPPVVTSEVEASKDTSELKVEPVMKEADGWTLNAKIKVEKDPTFSATAGLQ
TNISSDLNAEIGPGVYFDEKPPFVVELDGSLPFYMLDAYEEFSGSNAGNIYLFGKVKAGS
TYHSCCVVVKNMQRCMYAIPNGPVFEDSVIMNLERDVEESKISPTAFHTKLHEMASGLKA
NIKKQLLDRNVSNFSMKPVKRNYAFERSDIERKENYVLKISYPFKDPPLPSDLKGETFRA
LLGTHSSALELFLIKRKIKGPSWLSLSRFTTSSTAQRVSWCKFEVTVDSPKDIKIATSSK
NTGEIPPVVVTAINLKTVINQKQNINEIASASVICCHKAKIDTPMLASEWTRPGMLSHFT
VVRKLEDGLFPMGFNKEAADKNIKAGSNIISMESSERALLNRLMIELHKLDSDILVGHNI
SGFDLDVLLNRVKACKVPNSMWSKIGRLKRSEMPRLNKGNTVFGSGASPGIMSCIAGRLL
CDTFLCSRDLLKEVSYSLTELAKTQLSKNRKEIAPHDIPGMFQSSQSLMELIEIGETDAW
LSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKFMVPDKFYTP
KENKTVKRKSDGPEDKVNNDLGENDEIAPPGNEPVKSKKAASYAGGLVLEPKKGLYDKYI
LLLDFNSLYPSIIQEYNICFTTVERSEDGLVPRLPSATATGVLPELLKNLVERRKHVKRL
LKTASGLKYQQFDIQQQALKLTANSMYGCLGFSSSRFYAKPLAELITLQGREILQSTVDL
VRNNLNFDVIYGDTDSIMIYTGLDDINKAKSIAGNIIKEVNKRYKRLEIDLDGVYKRMLL
LKKKKYAAVKEQIRDGKIYKVIERKGLDMVRRDWSLLSKETGDFCLEQILSELSCEEVVE
AIHNKLRKVQEDMRKGEIGLEKYIITKTLTRPPEAYPDAKSQPHVEVALRLKKLGYTSGC
SAGDTVPYIICCEKGNGLSTSVGIAQRARHPDELTKDNENLMIDIDYYLAQQIHPVVSRL
CASIEGTSPATLADCLGLDPSKFQSKSSEVANNDHSGSVICMTDDEERYRGCEALNLSCP
DCCVSFKCPSVLSYIQTVALEKPQDLQDQSTNTTTTFWQKFCCPKCQVEFPPASLSNQVK
RRAELFISTYYKGFMTCDDETCDYTTRSLNLRVVGESERGTVCPNYPRCNGRLVRQYSEA
DVYKQLSYFCYLLDADRCIDKVDAKLRAAVEKEVGRIRGLVGLAFSTAQKVRDRCDYGWV
KLSDLFASI
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgatcagcggagacaaaggagaaaaactagaggaatgcagtctgaggagcgc
gctgaagcactccgcaagctcaaaatccgcagacaaggcggcggcgccgacattggcgaa
gaacgttacaagataaagatcgatgagccgatctacgataccgtcgatgacgatgagtac
gagaacctcgtggcccaacgacgtgaagattttaaagggtttatcgtggacgacgacggc
cttggttacggggacgaaggcgaagaagttgattggactaaatccggcgtaattccgtca
tcagaagaggaatcggaaggtgaattggagaaaaagaaaccgaagaagaaaacggaaaag
aaggaacataagaagccctcttttgaagccgcagctgctttaatgggtaagcaaaggata
tctaacttgtttacttctgccgttttcaataagagtaagccttcagtggcgtcttccgat
agtgttcttgatgatgtgcttgctgaatttgcgccggatgagaatgataaagagaaaagg
agacgaggaaacaaaagatcatcccagaatggcacagttttagcaccagctgctttgatt
acctcgattaagactgaaaatacacctgcaagtgtggtggctgtgaatactctatcgtca
aatagtttgtataaacacgacgtaatagaagaagggaaggaagtgctagaatttcctaaa
aatgaaacagatttgggtgttgtggaggagccaccggtggtgacaagtgaagttgaagca
tctaaggatactagcgaactgaaagttgagccagtgatgaaggaggccgatggttggact
ttaaatgctaaaattaaagtggaaaaggatccaactttcagtgcaacagcaggattgcag
accaacataagctctgatttgaatgctgagatcggtcctggtgtatattttgatgaaaaa
ccaccatttgtggtggaacttgatggatctcttcctttctacatgctcgatgcatatgag
gagttttccggttctaatgctggcaatatctatctatttgggaaggtgaaagcaggaagt
acttatcacagctgttgtgtggtcgtgaagaatatgcaaagatgcatgtatgctatccca
aatggtcctgtttttgaagactctgtcattatgaatcttgagagagatgttgaagagtca
aagatatcacctacagcttttcacaccaagcttcatgagatggcatctggattgaaggcc
aacataaagaaacaattgcttgatcgaaatgtttcaaactttagcatgaaacctgtcaag
aggaattatgcatttgaaagatccgacatagagcgcaaagagaattatgtactcaaaatc
agctatccattcaaggatccaccacttccttcagatcttaaaggagaaaccttccgtgct
ttgcttggaacacatagcagtgctttggagctttttcttatcaaaagaaagataaaggga
ccttcatggctatcactttcaagatttaccacctcttccactgctcaacgtgtaagctgg
tgtaagtttgaggttacagtggattctcctaaggacattaaaattgcaacctcttcaaaa
aacacaggagagattcctcctgtagttgttactgcaatcaatctgaaaactgtaataaac
caaaaacaaaacataaacgaaattgcatctgcatctgtcatctgctgtcataaggccaag
attgatacaccaatgttggcttcagaatggacaagacctggaatgttaagtcattttaca
gttgtacgtaagcttgaagatggattatttccaatgggatttaacaaagaagcagcagat
aaaaacataaaagctggatcaaacatcattagcatggaaagcagtgaaagagctttatta
aatcggttaatgattgaattacacaaattagatagtgatattcttgttggccacaacata
tctggatttgaccttgatgttcttctcaacagagtcaaggcttgcaaagttcctaatagc
atgtggtcaaaaataggaagacttaagaggtctgagatgcctagacttaataaaggaaat
acagtttttgggtcaggggcaagtccgggaattatgtcttgcattgctggcaggctttta
tgtgatacctttttgtgttctcgtgatcttttaaaggaggttagttattcattgacagaa
cttgcaaagactcagttgagtaagaatcgaaaagagattgctccacatgatattcctgga
atgtttcaaagttctcaatccttaatggaacttattgaaattggggagacagatgcatgg
ttgtcaatggaactcatgtttcatttgagtgttcttcctctcacacgacaactgactaat
attagtggtaatttatggggaaaaactcttcagggtgctagagctcaaagagtggaatat
ctattgttgcatgcatttcatgctaaaaaatttatggtacctgataagttttatactcca
aaagaaaacaaaacagtaaaacgtaaatcagatggcccagaagacaaagtaaacaatgat
ttgggtgaaaatgacgaaatcgcccctccaggaaatgagcctgtaaaatccaaaaaagca
gcttcatatgcaggtggactagtgttggaacccaaaaaaggtttatatgataaatacatt
ttgcttctggatttcaacagtctctacccctccattatccaggagtacaatatctgcttt
acaacagtagagagatctgaagatggtttagttcctcgattaccatctgcaacagcaact
ggagttttacccgagttactcaaaaatctggttgaaagaaggaaacatgtaaaaagatta
ttaaagacagcatcaggcctcaagtatcaacaatttgatatacaacaacaagcattgaaa
ctaacagccaacagtatgtatggatgccttggtttttccagttcaagattctatgcaaag
ccacttgcagaacttataacactacaagggagagagattttacaaagcactgttgatctt
gttcgcaacaatctaaactttgatgtgatttatggtgacactgattcaatcatgatatac
actggacttgatgatatcaataaagccaaatcaatcgcaggaaatatcatcaaagaggtg
aacaagagatacaagagattagaaattgatcttgatggtgtatacaagagaatgctgttg
cttaaaaagaagaaatatgcagctgtgaaagagcaaataagagatgggaaaatttataaa
gttatagagaggaaaggtctggatatggtcagacgtgactggagtttgttgtcaaaggag
actggagatttctgtcttgaacaaatattatctgagctgtcatgtgaagaagttgttgaa
gcaatacacaacaaactcagaaaagtacaagaggatatgaggaagggagaaataggtttg
gagaaatatatcattacaaaaacgttgactagacctcctgaagcctacccagatgccaaa
agtcaacctcatgttgaagtagcactcaggctgaagaaactagggtacaccagtggttgc
tctgctggagatacagttccttacataatttgctgtgagaaggggaatggtttgagtaca
tcagtagggattgctcaacgtgcaagacatccagatgaactcacaaaggataatgagaat
ttgatgattgacatcgactattatctagcacaacagattcatccagtagtatcgcgtcta
tgtgcatcaatcgagggtacaagcccagctactttagctgattgtttagggcttgatcct
tccaagtttcaaagcaaatcaagtgaagttgcaaacaatgatcattctggctctgttatt
tgcatgacagatgatgaagagagatacaggggttgtgaggctttaaatttgtcatgtcct
gattgctgtgttagttttaagtgtccatctgtactgagttacatacaaacagtagccctt
gaaaagccacaagacttgcaagatcaatcaaccaacaccaccactaccttttggcagaaa
ttctgttgccctaaatgtcaagtggaattccctccagcatcattatccaatcaggtaaaa
agacgagctgaattgttcatatccacatactacaaaggatttatgacgtgtgatgatgaa
acatgcgactacacaacacggagtttaaacttgcgtgttgttggtgagtcagaaagagga
acagtatgcccaaattaccctcgctgtaatggtcgtcttgtgagacagtattcggaggct
gatgtgtacaaacaactctcttacttctgttatctcctggatgcagatcgctgcattgac
aaggttgatgctaagttgagggctgcagttgagaaagaggttggtaggataagaggtttg
gttggattagctttttccacggcacagaaggttagggacaggtgtgattatggttgggtc
aaacttagtgatcttttcgcctcaatttag
DBGET
integrated database retrieval system
