Lactuca sativa (garden lettuce): 111876776
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Entry
111876776 CDS
T05352
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111876776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111876776
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111876776
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
111876776
NCBI-ProteinID:
XP_023729115
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Position
4:53407514..53410867
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AA seq
647 aa
AA seq
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MKFFDPEGRFILQWNKTFLLCSVIALSLDPLFFYIPIIDGTKRCLDVDHKLEIIVCVLRS
FADMLFVFHIIIQFRTAYVPRHNHILGKRIVRDEPHYVATRYFSSYFIIDVLAALPLPQL
AILVIIPNLDGPTPFLTERILKLVIFSQYVPRVIRISLFYKKVTKISGFLTEKAWAGAAF
NFFLYVLASHVVGALWYLFVIESEMRCWNIACERNNCYSKYLYCGEGRVGDFGFLSDSCP
LLERNEIKDSTNFDFGIFLDALQTRVLETRDFPQKFLYCSWWGLQSLSSLGQGLKASTFY
GEILFADFIAIIGLVLFALLIGNMQKYLQSFSNLTLRVEEMKEKRREAEDLMSHISLPEN
LRERVRRHKHYKWKITKGVELDSFVKDLPRDLRRDIKRHLCLSSLMRVPMFEAMDEHMMD
AMCDRLKPVLYTQNSYILREGDPVPEMLFITRGTLQSITTDGGRAGFFNSDHLRAGDFCG
EELLTWALAPPTPTLPFSTRTVQALTDVEAFALSVDDLMFVASQFKRLHSRHLQHTFRFY
SQQWRTWAACYIQSAWRRHWRRKLEMAKALEDSRMHDAFVRETSTLSLGASIYAARFSSN
ALRVLRRKNYTQLSKPVWQIMLPPKPPQPDFENHATAIVTFSGVWKE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttttgatccagaagggcgatttattctgcaatggaacaaaacctttttacta
tgttctgttatagcattgtcattggatccattatttttctatattcctataatcgatggc
acaaaaagatgccttgatgttgaccacaagttggagataattgtatgtgttcttcgttct
tttgcggatatgttatttgtatttcacattattatccaatttcgaactgcatatgttcct
cgtcataatcacatacttggaaagagaatagttagagatgaacctcattatgtggcaaca
cgttacttttcatcctacttcatcattgatgtgctagcagcccttccacttccacagttg
gcaattttggtaattatcccaaatttagatggccctactccgtttttgactgaaagaatt
ttgaagctcgttattttctctcaatatgtccctcgagttattcggatttctttattctat
aaaaaggtgacaaaaatttctggcttcctcactgaaaaagcatgggctggagctgctttt
aactttttcctctatgtgctagctagccatgtagttggagccctgtggtacttgtttgta
atagaaagtgaaatgagatgttggaatattgcatgtgaaaggaataattgttactccaag
tatttgtactgtggagaagggcgtgttggagattttgggtttttgagcgattcatgccct
cttcttgagcgaaatgaaattaaagattcaacaaactttgattttggaatatttcttgat
gctcttcaaactcgtgtgctggaaactagagacttccctcagaaattcttgtattgttca
tggtggggcttgcagagtctaagttcacttggtcaaggccttaaagcaagcactttctat
ggggagattctatttgcagacttcattgccataattgggctggttctattcgctttgctt
attggtaacatgcagaaatacttgcagtctttctcaaacctgactctaagagtggaggag
atgaaggaaaaaaggcgagaagcagaggatctcatgtcacatatttccctccctgaaaat
ttaagggaacgagttagaagacacaagcattacaaatggaagataacaaagggtgttgag
ttagattcctttgtcaaagaccttcctcgggatttgaggagggacataaaacgtcatctt
tgcttgtcttcactcatgagagtacctatgtttgaagcaatggatgaacatatgatggat
gccatgtgtgatcgtttgaagccagttctttacacacaaaatagctacatactcagagag
ggagatccagtacctgagatgctcttcatcacacgtgggaccctacaaagtattacaact
gatggtggaagggctggcttcttcaactctgatcacctcagggctggtgacttctgtgga
gaagagcttctgacatgggctttggctcctccaactccaacactccctttctcaactaga
actgttcaagcacttacagatgttgaagcttttgctctatcagttgatgatctcatgttt
gtggcttcccagtttaaacgtctccacagcagacatctccagcatacttttagattctac
tcacaacagtggaggacatgggcagcatgctacatacagtcggcatggcgtagacactgg
agaaggaagctggaaatggctaaagcattggaggatagtagaatgcatgatgcctttgtt
agggaaacctccacactcagccttggtgcctccatttatgctgctagattttcctctaat
gccttgcgcgtgttgaggcgcaagaattacacacaactgtcaaaacctgtttggcaaata
atgctgccacccaagccaccacagccggattttgagaatcatgcaacagcaatcgttacc
ttcagtggagtatggaaggaatga
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