Lactuca sativa (garden lettuce): 111876777
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Entry
111876777 CDS
T05352
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
111876777
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111876777
Ion channels [BR:
lsv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
111876777
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
111876777
NCBI-ProteinID:
XP_023729116
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Position
4:53425007..53431006
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AA seq
638 aa
AA seq
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MKFFDPEGGFILQWNKTFLLCSVIALSLDPLFFYIPIVDGTQKCLDVDHKLKMVVCVLRS
FADMLFVFHIIIQFRTAYVPRHNHILGKRIVRDEPHYVATRYFSSYFIIDVLAALPLPQL
AILVIIPNLDGPTPFLTERILKLVIFSQYVPRVIRISLFYRKVTKISGFLTEKAWAGGAF
NFFLYVLASHVVGALWYLFAIESELRCWAIACQRHNCDSKYLYCGEGRMGDFGFLNDSCP
LLERNEIKDSTNFDFGIFLDALQTRVLETRDFPQKFLYCSWWGLQSLSSLGQGLKASTFY
GEILFADFIAILGLVLFALLIGNMQKYLQSFSNVTLRVEEMKEKRREAEDLMSHISLPEN
LRDRVRRHKHYKWKITKGVELDSFVRGLPRDLRRDIKRHLCLPSLMRVPMFEGMDGHLMD
AMCERLKPVLYTQNSYILQEGDPVPEMLFITRGRVLSFTTDGGRSNFLNYTDLGAGDFCG
EELLTWALDPATPALPFSTRTVQAVTDVEAFGLEVDDLMFVASQFRRLHSRRLQHTFRFY
SQQWRTWAACYIQTAWRRHRKRMQELEDTLQDALATVRESSSLSFGALIYVARFSSNALR
MLRQINAQAQLSTPNLHLMLPLKPAHPNFENDTTIATL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttcgatccagaggggggatttattttgcaatggaacaaaacttttttacta
tgttctgtcatagcactgtctttggatcctctgtttttctacattcctattgttgatggc
acacaaaaatgccttgatgtggaccacaagttgaagatggttgtatgtgttcttcgttct
tttgcggatatgttatttgtatttcacattattatccaatttcgaactgcatatgttcct
cgtcataatcacatacttggaaagagaatagttagagatgaacctcattatgtggcaaca
cgttacttttcatcctacttcatcattgatgtgctagcagcccttccacttccacagttg
gcaattttggtaattatcccaaacttagatggccctactccgtttttgactgaaagaatt
ttgaagctcgttattttcagtcaatacgtccctcgagttattaggatttctttgttctat
agaaaggtgacgaaaatttctggcttcctcactgaaaaagcatgggctggaggcgctttt
aactttttcctctatgttctagctagccatgtagttggagccctatggtacttgtttgca
atagaaagcgaactgagatgctgggctattgcatgtcaaaggcataattgtgactctaaa
tatttatattgtggtgaaggccgcatgggagattttgggtttttgaacgattcatgccct
cttcttgagcgaaatgaaattaaagattcaacaaactttgattttggaatatttcttgat
gctcttcaaactcgtgtgttggaaacaagagacttccctcagaaattcttgtattgttca
tggtggggtttgcagagtctaagttctctgggacaaggccttaaagcaagcactttctat
ggggagattttatttgctgatttcattgctatccttgggttggttctatttgccttactt
attggcaacatgcagaaatatttgcagtctttctcaaacgtgactcttagagtggaggag
atgaaggaaaaaaggcgagaagcagaggatctcatgtcacatatttccctccctgaaaat
ttaagggaccgagttaggagacacaagcattacaaatggaagataacaaagggtgtcgaa
ttagattcctttgtcagaggccttcctcgggacttgaggagggacataaagcgtcatctt
tgcttgccttcactaatgagagtacctatgtttgaaggcatggatgggcatctaatggat
gctatgtgtgagcgtctgaagccagttctctacacacagaatagctacatactccaagag
ggagatccagtacctgaaatgctcttcataacacgtggcagggtgctaagtttcacaact
gatggtggaaggagtaacttcttgaactatacagacctcggggctggtgacttctgcgga
gaagagcttctgacatgggctttggatcctgcaactccggcacttcctttctcaactaga
actgtccaagcagttacagatgtcgaagcttttggtctagaggttgatgatctcatgttt
gtggcttcccagtttaggcgtctccacagcagacgcctccagcatacttttaggttctac
tcacagcagtggaggacatgggcagcctgctacatacagacagcatggcgtagacaccgt
aaaaggatgcaggaactggaagacacattgcaggatgccttggccaccgtcagggaaagc
tccagcctcagctttggtgccttaatctatgtggctagattttcctccaatgccttacgc
atgttgaggcagattaatgcccaagcccagctatcaacacctaacctgcacctcatgcta
cccctgaagccagcacaccccaattttgagaatgatactacaatcgctaccctttag
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