Lactuca sativa (garden lettuce): 111876779
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Entry
111876779 CDS
T05352
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 31
Organism
lsv
Lactuca sativa (garden lettuce)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
TFIIE-A_C
Motif
Other DBs
NCBI-GeneID:
111876779
NCBI-ProteinID:
XP_023729119
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Position
4:53479899..53483511
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AA seq
797 aa
AA seq
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MPFNFFSPPHLRLLNSSSFLVTRFIMKSNPSVSKGNEVFTRVFPHKMKYQSSSPVKKLGL
PNLITTAQSQLQFSTRASKHGSEDRSAKSLIEDEAELSDWVSELKSDSFKKSRLYSESDD
GENDWGGGAGSTVKRKREGDSDRERGRGGSRGSFNGDSRGKGRSGGEFGRRDDGFVSKRE
NGFGNGRGGRDSGSSRGRGRFGGEVDRRNDRFSRDKTKEDDGFVSKRRDDNFNGRGRGGR
GGGVVRGGKSMSKANLMSSDQDEDDEEEEHKNITSKFRELISDEDDDDDEDEDLDDDVEV
LGNGHSVKNVASSSPRASPDGSESYLSGTRFDQCAVSPQSLKAIKDAGYEKMTVVQEATL
PVILKGKDVLAKARTGTGKTVAFLLPSIEVVAKSPPVSRDQKRSPILVLVICPTRELASQ
AAMEAKKLLKYHPSIGVQVVIGGTRLGLEQKRMQASPCQILVATPGRLKDHIENTAGFAT
RLMSIKVLILDEADHLLDMGFRKDIERIIAATPKQRQTLLFSATVPPEVRQICHIALKRD
HEYINTVQEGSEETHTQVQQKHLIAPLDKQFSILYTLLKDHIADDSDYKVLVFCTTAMFT
KLVADLLGELKLNVREIHSRKPQSYRTRISDEFRRSKGLILVTSDVSARGVDYPDVTLVI
QVGVPADKAQYIHRLGRTGRKGKEGEGIIMLAPWEEFFLSTLKDLPISKAALPLVDPDTK
KKVEKALSNVEMKNKESAYQAWLGYYNSNKTIGKDKYRLVELANEFSRSMGLDNPPAIPR
LVLGKMGLKNVPGLRSK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcaacttcttttcaccgccacacctccgtctccttaactcgtcttcattcctc
gtaacccggttcatcatgaaatcaaacccatcagtatcaaagggaaacgaggttttcact
cgggtatttcctcacaaaatgaagtaccaatcgtcctcaccagttaagaaattagggctc
cctaatctgataacgacagctcaatcccagttgcagttttcgacaagggcttccaaacac
ggctctgaagatcggtcggctaagagcttaattgaagatgaagctgaacttagtgactgg
gttagtgaattgaagtccgactcatttaaaaaatctcgtttgtatagcgaaagcgacgat
ggtgaaaacgattggggaggtggtgctggctcaactgttaagagaaagcgagagggtgat
tcagacagagagaggggacgaggaggaagtaggggttcttttaatggtgattcgagggga
aaagggcgttctggtggtgaatttggaaggagagatgatgggttcgtctccaaaagggag
aatggattcggaaatggaagaggagggagggattctggtagttcaagagggcgagggcga
tttggtggtgaagtagacagaagaaatgatagattttctcgtgataaaacaaaagaggat
gatgggtttgtgtcaaaaagaagagacgataatttcaatggcagggggagaggaggaaga
ggaggtggcgtagtaagaggtggtaagagcatgagtaaagcaaacttgatgtcgtctgat
caagatgaagatgatgaagaagaggaacataagaacattaccagtaagttcagagaattg
atcagcgatgaagatgatgacgatgatgaagatgaagacctcgatgatgatgttgaggta
ttaggaaatggacattcagtgaaaaatgttgcatcgagttcacctagagcttcacctgat
ggaagcgaatcctatctgagtggaacaaggtttgatcaatgtgcagtttcaccacaatct
ctaaaagcaattaaggatgctggctatgaaaagatgactgttgttcaggaggcaacactt
cctgtcattcttaaagggaaggatgttttggctaaggctagaacaggaactggaaaaact
gttgcatttcttctcccatcaatcgaagttgttgcaaaatcgccacctgtcagccgtgat
caaaagcgttctccaattcttgtccttgtcatatgccctacaagagagcttgcaagtcaa
gctgccatggaagccaagaaattactaaaataccatccttccattggtgtccaagttgtc
attggtgggacccgccttggtcttgaacaaaaacgcatgcaagcaagcccatgccagatc
cttgtagcgacacctggcaggctgaaagatcatattgagaatactgcaggatttgccact
agactaatgagcatcaaagtcttaattcttgatgaagctgatcatttattggacatggga
tttagaaaagatattgaaagaatcatagcagctacaccaaaacaaagacaaactcttcta
ttttcagccactgtcccacctgaggtacgccaaatttgccatattgctttaaaaagagac
catgaatacatcaacactgtccaggaaggtagtgaagagacccatacacaggtccaacaa
aaacatttaattgctccactggataagcaattttcgatactgtacactctcctaaaagat
catattgcagatgattctgactataaggttcttgtgttttgcacgactgcaatgtttaca
aaacttgttgcagacttacttggtgagctgaagttaaatgtgagagaaattcattcaaga
aagccacaaagttataggactcgaatttcagatgagtttaggagatcaaagggtcttatt
ctagtaacatctgatgtgtcagcacgtggggtcgattatccagatgtcacacttgtcatt
caggttggggttccagctgataaagctcagtacattcataggcttggaagaacagggcgt
aaagggaaagaaggtgaagggataataatgttagcaccatgggaagagttctttttgtct
actcttaaagatttgccaatttcaaaagctgctttacctttagtggatccggatacaaag
aaaaaggtggagaaggcgttgtctaatgtggaaatgaagaacaaagaatctgcatatcag
gcatggcttgggtattataattcaaataagacgattgggaaggataaatataggctagta
gagcttgctaatgagtttagtagaagcatggggcttgataatccacctgcaattccaaga
cttgttcttggtaaaatggggctcaagaatgttccaggattgaggtctaagtga
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