Lactuca sativa (garden lettuce): 111876870
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Entry
111876870 CDS
T05352
Name
(RefSeq) truncated transcription factor CAULIFLOWER A
KO
K09264
MADS-box transcription factor, plant
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111876870
Transcription factors [BR:
lsv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
111876870
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Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
PRIMA1
FliD_C
HAUS6_N
Gp41_Mu
ATP-synt_G
DUF4200
Motif
Other DBs
NCBI-GeneID:
111876870
NCBI-ProteinID:
XP_052625390
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Position
3:complement(157239771..157246532)
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AA seq
247 aa
AA seq
DB search
MGRGRVQLKRIENKISRQVTFSKRRTGLLKKAHEISVLCDADVALIVFSTKGKLFEYSTH
SSMEAILERYERYSYAEKLLTAPETETQGSWTLESSKLRAKIEVLEKNIRHYVGEDLEPL
NLRELQSVEQQLETALKRIRTRKNQVMHESISELHKKERALQEQNNALSKKLKENDKNND
QQNVGFMLPQTHQPPPPPPPPPPPQPPHLRPLTIGSGSFHGAVVIREDESAQAHTMMPPW
LLRHMNQ
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggggagaggaagggtgcagttgaagaggatcgagaacaagattagcagacaggtgacg
ttctccaaaagaagaacaggcttgttgaagaaagctcatgagatctctgtgttgtgtgat
gctgatgttgctcttattgttttctctactaaaggcaaactctttgagtattccactcac
tcgagtatggaggcaattcttgaaaggtatgaacgatactcgtatgcagaaaagctgctt
actgcgcctgaaacagaaacacagggaagttggactcttgaatcctcaaagctcagggca
aagattgaggttcttgaaaagaacattaggcactatgttggggaagaccttgagcctttg
aatcttagagagcttcaaagtgtagaacaacaactagagactgctctcaaacgaatacga
acaaggaagaatcaagtcatgcatgagtccatctcagaacttcataaaaaggagagagca
ctgcaagaacagaacaatgcactctctaagaagttgaaagagaacgacaagaacaacgac
caacaaaatgtagggtttatgttacctcagactcatcagccaccaccaccaccaccacca
ccaccaccaccacaaccaccccacttacgtcctcttacaatcgggagtggatcgttccat
ggagcggttgtaataagggaggatgaatcagctcaagctcataccatgatgcccccatgg
ctgcttcgtcacatgaaccaataa
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