Lactuca sativa (garden lettuce): 111876979
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Entry
111876979 CDS
T05352
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111876979
03009 Ribosome biogenesis [BR:
lsv03009
]
111876979
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111876979
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
90S particles
RNase
111876979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
111876979
NCBI-ProteinID:
XP_023729299
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All DBs
Position
4:complement(273456954..273461739)
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AA seq
415 aa
AA seq
DB search
MKIAIEGCMHGDLDNVYATLLHLQEVERTKIDLLICCGDFQAVRNEKDLESLSVPPKYRS
MNSFWKYYSGEKVAPFPTIFIGGNHEASNYLWELYYGGWAAPDIYFLGFAGVVKFGGIRI
GGISGIYKSRDYRSGHFERAPYNNSDIKSIYHVREYDVHKLMQIEEPVDIFVSHDWPLGI
TDHGNWKDLVRDKPYFQKEIEERSLGSKAAAELLEKLKPPYWFSAHLHCKFAALVQHQDG
GQLTKFLALDKCIPRRKFLQIIEVESGPGPYEIEYDEEWLAITRRFNSIFPLTKMPMNFG
GVEFEMEECRNWIKSRLKSRGSSKPFEFVRTVPCYNSSQTLANHSFSGHIHNPQTESLLE
FLEVEYLLDKSGPTHSQSPASGSVDYDSEDGPIEEDADEIQLPEEEEEEEDDVKM
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcaatagaaggctgcatgcatggggatttggataatgtatatgcaactctc
ttgcatttacaagaagtcgaaaggacaaaaattgatcttttaatatgctgtggtgatttc
caggctgttaggaatgagaaggatttagaaagcttaagtgttccacctaaatacagaagc
atgaactctttctggaaatactactcaggagaaaaagtagccccatttccaactattttc
attggaggaaatcatgaagcttccaattacctctgggaattatactatggaggatgggca
gcacctgatatatacttcttgggatttgcaggagttgtcaaatttgggggtattcgcatt
gggggcatttctggaatttacaagtcccgagattatcgctcaggacattttgaaagggct
ccatataacaacagtgatataaagtcaatataccatgtgagagaatatgatgttcacaaa
ctcatgcaaattgaagaacctgttgacatttttgtgtcacatgattggccacttggcatc
actgatcatggaaactggaaagatcttgttcgtgataaaccttattttcaaaaggagatt
gaggagagaagtttgggaagtaaagctgctgcagaattgctagagaaactaaaacctcca
tactggttttctgctcatttacattgcaaatttgctgctttagttcaacatcaagatgga
ggtcaactcacaaagtttcttgctcttgataaatgtatcccaaggcgtaaatttttacag
attattgaagttgaatcgggtcccgggccatatgagattgaatatgatgaagagtggcta
gctatcacccgtagattcaattccattttccccctcactaaaatgccaatgaattttggg
ggtgtagagtttgagatggaagaatgtcgtaactggataaagagtaggctgaaatccaga
gggagtagtaaaccttttgagtttgttcgcactgttccttgttataattcttctcaaact
ctcgctaatcattccttttcagggcatattcataatcctcaaacggaatctctattagag
tttttagaagttgagtatcttcttgataagagtgggcccacccacagtcaaagtccagcg
tcaggttcagttgattatgatagtgaagatggacccattgaagaagacgcagatgaaata
caactccctgaggaagaggaggaagaagaagacgacgttaaaatgtaa
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