KEGG   Lactuca sativa (garden lettuce): 111877073
Entry
111877073         CDS       T05352                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
lsv  Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsv03036]
    111877073
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111877073
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111877073
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111877073
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_EZ Cnd1 HEAT_2 HEAT_EF3_N TOR1L1_N
Other DBs
NCBI-GeneID: 111877073
NCBI-ProteinID: XP_023729378
LinkDB
Position
4:complement(175208818..175214926)
AA seq 1041 aa
MGDSTTINCVKHIETYVDSSSSKSPAEQDASLDAIAKLVMNDMITLESLVREMGMYLTTT
DNIIRARGILLLAELLTRISSKPLENATIHSLIGFFAERLSDWRALRGALVGCLALMRRK
GDISSSDATAVAQSFMQNLQVQSLGQHDRKLCFELLECLIDCYPNTVMTMEDDFVYVICE
AIDGEKDPQCLLLTFHLVEMLSHLYPDSSNSLTSYAEDLFNILGSYFPIHFTHPKGEDDV
KREELSRALMLAFASTPLFEPFSIPLLLEKLSSSLPSSKVESLKYLSYCTLKYGPHRMLQ
HLESLWSSLKEAIFTSDQSNSNKIASEALVLLQNLIQQDNGVFVNLILKDADINLTLNSL
SNYNNHDDSPMPDQQRLNSIGQILHVSSAASMASCNAIFQSFFSGLVNGLEKDYASEKPK
FGCLYICVELLAACRILVMKNDEVSYNENETWCIMLHSFCDSLISSFVKSIKESNEDSYT
QSGVRGLKILASFPGSFSPVSKSTFENILREFISIIILKFNNTSLWSSILDSLTEIGSFI
EKSQDSEKMPSFDAIIVDKMVDLLSSDDSTMPFSLKVKSVSEIGLINLKYMMKIVQELNK
TIITSLHKSWIDGDSKSVEHAMILLECYDDKILPWFQNIKDSDDVATNFALKIWDEIEDN
TLFYDTLVEKKLLETTMNTMKHAVATCSEENQTKILEKSFKVNESNLVNKVSQPRNKWII
SLFNSVIIALHPKTNIKNPKKTLETLIESLTNGHTSSAHALGSFFNKIPSNEAIIDNTFS
HLIKFSNVNAIIGLSWMGKGLLMRGHEKVKDLIKFFLDFLILNSPQDQEMVDLMRSVADS
FGIMMSDSEFCLNKRLNSVIKPLYKQRLFSIVMPILSSSIVKLDSPVTRSMQHRALAHVI
SNAPLSAVLGEAKKLIPLMLDGLTILSEDVENRDILYNLLLVLSGILTNKNGEEVIVENA
YIIIRCINKLVAYPHMMLVRETAVQCLTAMSEVSYARVYPFRPEVLQALSRALDDPKRSV
RQEAVRCRQAWASVSSRSLHI
NT seq 3126 nt   +upstreamnt  +downstreamnt
atgggggactcaactacgattaactgcgttaagcacatcgaaacgtatgtcgattcgtcg
tcgtctaaatctccggctgaacaggatgcaagtttagatgcaattgcgaagctcgtgatg
aatgatatgataactctggaatcactggtaagagaaatggggatgtatttaactactaca
gacaacatcattcgtgccagaggcatcctccttcttgcagagttgttgacacgcatatca
tcaaagcctttagaaaatgcaacaatacatagtttgattgggttttttgcagaaagactg
tcagattggagagcactacgtggtgcacttgttggttgtttggctctaatgagaaggaaa
ggtgacatcagcagcagtgatgcaactgcagttgctcaatcattcatgcaaaatctacaa
gttcaatctttaggtcaacatgacagaaagctttgctttgagcttctagaatgccttata
gattgttatcccaacactgtgatgacaatggaggatgactttgtttatgtaatctgtgaa
gctatagatggtgaaaaagatccacaatgtttattgcttacttttcatctagtggaaatg
ctatcacatttgtatccagattcatctaattcactaacaagctatgctgaggatcttttt
aacattttgggatcttatttcccaattcactttacacacccaaaaggagaagatgatgtg
aaaagggaagagctctcaagggcactaatgctggcgtttgcatctactcccctttttgag
ccgttttccattccattacttcttgagaaactttcttcatctcttccatcatcaaaggtt
gaatcattgaagtatcttagctactgcacacttaaatatggaccccacagaatgctacaa
catcttgaatctctttggtcatcattaaaagaggcaatattcacatcagatcaatctaat
tccaacaaaatagcatctgaagctcttgttcttctacaaaatctcattcaacaagataat
ggcgtatttgtaaatttaatcctaaaggatgcagacatcaacttgaccttgaactccctc
tcaaattataacaatcatgatgattctccaatgccagatcagcaaagattaaactcaatt
ggtcagattttacatgtttcatctgcagcttccatggcttcttgtaatgcaatctttcag
agttttttctctggtttagtaaatggtttggagaaagattatgcttctgaaaaacctaaa
ttcgggtgcctttatatctgtgttgaattattagctgcttgcagaattttggttatgaaa
aatgatgaagtgagttataatgagaatgagacatggtgtatcatgcttcatagcttctgt
gattcattgatttcttcttttgtaaaaagtattaaagaaagcaatgaggattcctacact
caatctggagttaggggtttgaagattttagcttcatttcccggaagtttctcgcctgta
tcaaaatccacatttgagaatattttgagagaatttatttcaattattatcctcaagttc
aacaatacatctctatggagctccatattagactcgttaactgaaatcggctcatttatt
gaaaaatctcaagattctgagaaaatgccaagctttgatgctattattgttgacaaaatg
gtggatttgttgtcttctgatgattcaacaatgcccttttcacttaaagtgaaatcagta
tctgaaattggcttgattaatcttaagtatatgatgaagattgttcaagaactgaacaaa
actatcattacaagtttacacaaatcttggattgatggagactcaaagtcagttgaacat
gcaatgattcttttggaatgctatgatgacaagatacttccatggtttcagaatatcaaa
gattctgatgatgtggcaacaaattttgcattaaagatttgggatgaaattgaagataac
acacttttctatgacacccttgtggaaaaaaagcttctagaaacaacaatgaacacaatg
aagcatgcagtagcaacatgttcagaggagaatcaaaccaaaattcttgaaaaatccttc
aaagtcaacgaatccaatctggtcaacaaagtctcccaaccaagaaacaagtggattatc
tcattatttaattcagtcataatcgcccttcacccaaaaacaaacataaaaaaccccaaa
aaaacccttgaaacactcattgaatctctcacaaatggccacacctcatcagctcatgct
ttaggatcctttttcaacaagattccttcaaatgaagcaataatagataatacatttagc
cacttaataaaattctctaatgttaatgcgattattggattatcatggatgggaaaaggg
ttgcttatgaggggacatgaaaaggtaaaagatttgatcaagtttttccttgatttcttg
attttaaattcacctcaagatcaagaaatggtggatttgatgagaagtgttgcagattct
tttggtattatgatgagtgattctgagttttgtttgaataaaagattaaattcggttata
aaaccgttgtataagcaacgattattcagtatagtgatgccaattttatcatcatcaatt
gtgaagttagattcaccagttacaagatccatgcagcatcgagcacttgcacatgtcata
tctaatgctccattgagtgctgttttgggtgaagccaagaagcttattccattgatgcta
gatggtttaacaatccttagtgaagatgttgaaaatcgagacattttatataacctcctc
cttgttttatcaggaatattgactaataaaaatggtgaagaagtgattgtggaaaatgca
tacatcatcatcaggtgtatcaacaagcttgtagcctacccacatatgatgttggtacgt
gagacagctgttcagtgtctgactgccatgtcagaggtgtcttacgctagggtttatcca
ttcagaccagaggtgttacaagcgttatcaagagcacttgatgatcctaagagaagtgtt
cgtcaagaagctgtcagatgtcgccaagcatgggcctcagtttcatccagaagtcttcat
atttga

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