Lactuca sativa (garden lettuce): 111877196
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Entry
111877196 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111877196 isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111877196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111877196
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111877196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
111877196
NCBI-ProteinID:
XP_023729488
LinkDB
All DBs
Position
8:26160005..26161994
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AA seq
286 aa
AA seq
DB search
MEDQIIATSKTVGAVKANNGGGQQLLETTKSERHVWLMKCPPIVSRSLTQQQQQQQPQLS
TPLDASSAPIGAKVVVTVDPLLPNNDFSSTQFTMELLGTESGRIPKCYSMDMSTDFIPMS
VFSESKQGRLSVEGKIYHKFDMKPHNENIEEYGKLCRERTNKYMTKTRQIQVIDNDNGAH
MRPMPGLIAFRPPSQTQRKKAPVKGSDTKRTRRDRGEMEDIMFKLFERQSNWTLKQLISE
TDQPEQFLKDMLKDLCIYNNKGSNQGTYELKPEYKRTTEEQEPSSK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaaatcatcgccaccagcaaaaccgtcggcgccgtgaaggctaacaacggc
ggtggacaacaattgctagagacgaccaaatcagagagacacgtatggctcatgaaatgc
cctccaattgtgtctcgttcacttacgcaacaacagcaacaacaacaaccgcaattatcg
acgcctctcgatgcttcttcagctccaatcggcgcaaaggttgtcgtcaccgttgatcct
ctcctccctaacaacgatttctcatctacacagtttaccatggagttgcttggcactgaa
tctgggagaatacccaaatgttactccatggacatgtcaacagattttatcccaatgtct
gtattttccgaatccaaacaaggaaggctttctgttgaagggaaaatatatcataaattt
gacatgaaacctcataatgagaacatagaggaatatgggaagctctgtcgtgaaagaaca
aacaagtatatgactaaaactcgacaaatacaggttattgacaatgataatggagcacat
atgagacccatgccagggcttattgcattcagacccccctcacaaactcagaggaagaaa
gctccagtgaaaggatcagacacaaaaagaacaagaagggatcgtggagagatggaggac
attatgtttaaattatttgagagacaatccaattggacattaaagcagcttatttctgaa
acagatcaacctgaacaattcttgaaagatatgcttaaggatttgtgcatctataacaac
aaaggatcaaaccaagggacttatgaactgaagccagaatacaagagaaccacagaggaa
caagaaccttcttcaaaatag
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