Lactuca sativa (garden lettuce): 111877329
Help
Entry
111877329 CDS
T05352
Name
(RefSeq) autophagy-related protein 8C-like isoform X1
KO
K08341
GABA(A) receptor-associated protein
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111877329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111877329
04121 Ubiquitin system [BR:
lsv04121
]
111877329
03029 Mitochondrial biogenesis [BR:
lsv03029
]
111877329
Membrane trafficking [BR:
lsv04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
111877329
Ubiquitin system [BR:
lsv04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
111877329
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111877329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
111877329
NCBI-ProteinID:
XP_042752227
LinkDB
All DBs
Position
7:197329090..197331503
Genome browser
AA seq
121 aa
AA seq
DB search
MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERTDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSAEKAIFIFVKNVLPPTVKNKFQTFFNIKDLVYMMRLFATLFSCYDVCN
I
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagctccttcaaactagagcatcctctggagaggcgacaagctgaagctgct
cgtatcagagaaaaatatcctgacagaattccggttattgttgaaaaggctgaaagaact
gacatacctgacattgacaagaaaaagtatctggtacctgctgatctgactgtaggacag
tttgtttacgtggtcagaaagcgtattaagctcagtgctgaaaaggccatttttatcttt
gtcaagaatgttctgccacctactgttaagaataagtttcaaaccttttttaatattaaa
gatctcgtgtatatgatgagattatttgcaactttgtttagctgctatgatgtctgcaat
atatga
DBGET
integrated database retrieval system
