Lactuca sativa (garden lettuce): 111877435
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Entry
111877435 CDS
T05352
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111877435
03009 Ribosome biogenesis [BR:
lsv03009
]
111877435
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111877435
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
90S particles
RNase
111877435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
111877435
NCBI-ProteinID:
XP_023729729
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All DBs
Position
6:189857867..189860868
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AA seq
409 aa
AA seq
DB search
MKIAIEGCMHGDLDNVYATLLHLQEVERTQIDLLICCGDFQAVRNEKDLESLSVPPKYRS
MNSFWKYYSGEKVAPFPTIFIGGNHEASNYLWELYYGGWAAPDIYFLGFAGVVKFGGIRI
GGISGIYKSRDYRSGHFERAPYNNSDIKSIYHVREYDVHKLMQIEEPVDIFLSHDWPLGI
TDHGNWKKLVRDKPYFEKEIEERSLGSKAAAELLEKLKPPYWFSAHLHCKFAALVQHQDG
GQVTKFLALDKCIPRRKFLQIIEVESDPGPYEIEYDEEWLAITRRFNSIFPLTKMPMNFG
GVEFEMEECRKWVKSKLKSRGSSKPFEFVRTVPCYNSSQTLANHSFSGHIRNPQTESLLE
FLEVGYLLDKSGPTPSQSQSPVAVDYDSEDGPIEEDADEIQLPEEEDDV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcaatagaaggctgtatgcatggggatcttgataatgtatatgcaactctc
ttgcatttacaagaagttgagaggacacaaattgatcttctaatatgctgtggtgatttc
caggctgttaggaatgagaaggatttagaaagcttaagtgttccacctaaatatagaagc
atgaattctttctggaaatactactcaggagaaaaagtagctccatttccaactattttc
attggaggaaatcatgaagcttccaattacctctgggaattatactatggaggatgggca
gcacctgatatatacttcttgggatttgcaggagttgtgaaatttgggggtattcgcatc
gggggcatttctggaatttacaagtcccgagattatcgttcaggacattttgaaagggct
ccatataacaatagtgatataaagtcaatatatcatgtgagggaatatgatgttcacaaa
ctcatgcaaattgaagaacctgttgacatttttttgtcacatgattggccacttggcatc
actgatcatggaaactggaaaaaacttgttcgtgataaaccttattttgagaaggagatt
gaggagagaagtttgggaagtaaagctgctgcagaattgttagagaaactaaaacctcct
tactggttttctgctcatttacattgcaaatttgctgctttagttcaacatcaagatgga
ggtcaagtcacaaagtttcttgctcttgataaatgtatcccaaggcgtaaatttttacag
attattgaagttgaatcggatcctggtccatatgagattgaatacgacgaagagtggcta
gcaatcacccgtagattcaattccatttttcctctcactaaaatgcctatgaattttggg
ggtgtagagtttgaaatggaagaatgtcgcaaatgggtgaaaagtaagctgaaatccaga
gggagtagtaaaccttttgaatttgttcgcactgttccttgttacaattcttctcaaact
ctcgctaatcattccttttcagggcatattcgtaatcctcaaacggaatctctattagag
tttctagaagttgggtatcttcttgataagagtgggcccacccctagtcaaagtcaaagt
ccagtcgcagttgattacgatagtgaagatggacccattgaagaagatgctgatgaaata
caactcccagaagaagaagatgatgtttaa
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