Lactuca sativa (garden lettuce): 111877539
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Entry
111877539 CDS
T05352
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111877539
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111877539
04147 Exosome [BR:
lsv04147
]
111877539
04090 CD molecules [BR:
lsv04090
]
111877539
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
111877539
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
111877539
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111877539
CD molecules [BR:
lsv04090
]
Proteins
111877539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_22
AAA_29
Zeta_toxin
DLIC
AAA_16
TMEM70
nSTAND1
Motif
Other DBs
NCBI-GeneID:
111877539
NCBI-ProteinID:
XP_023729827
LinkDB
All DBs
Position
8:complement(289419976..289425700)
Genome browser
AA seq
1243 aa
AA seq
DB search
MGKKGGMFYYADGIDKLLLLFGTIGSIGDGLMSPLTMVILSGVIDEYGTGGVSISNDVVD
KYGLKLLILAIGIAISAFIEGICWTRTAERQTSRLRMEYLKSVLRQEVGFFDTQVGSSTN
FEVITAISGDAQLIQDVMADKIPNCLAHLSALFFSIVVAFTLSWRLAIASLPFALLFVVP
VLGVGVLLKKLGMKMQGAYNTGGGVAEQAISSIRTVYSYVGEQQTINKFSNALQTSMELG
IKQGFTKGLMIGSMGMIFVAWAFVAWVGSYLVIEKGESGGRVFVTAICVIMAGLSAMSAL
PNVPFISDATAATTKMFEMISRIPRIDSENHKGKTFPSVSGHIEFRNVEFSYPSRPDSPI
LQGLNLKVKAGKTIGLVGGSGSGKSTIISLLERFYDPIKGDILLDGHRIKGLQLKWLRSQ
MGLVNQEPVLFATSITENILFGKEGVSKEFIEVATKAANAHNFIVNLPNGYETQVGQFGI
QLSGGQKQRIAIARALLKEPKILLLDEATSALDTESERVVQEALDQASIGRTTIIIAHRL
TTIRKADKIVVLQSGKVIESGSHDELMQKNNGEEGGAYYQMVQLQQSATQNETLDYTPYT
PISQRNLNHQHQTPTTPISGRSSFQNSPMSPISPTLSMAHSVQMYSYQESDDEYLIETPE
SSPSQWRLLQMNAPEWKNALLGCLGASGFGAISPIHAYFLGSVVSVYFLPDKGKVKSETG
FYCIVFVCLGIGCFFTNLLQHYNFAVMGERLTKRVREKMLENVLTFEVGWFDRDENTSAA
VCARLATEASLIKSLVGDRMSLLLQVFVSAFLSFLLALIITWRVSIVMIAVQPLLIASFY
SKIVLMKNLSAKAKKAQNEGTQLASEAVVNHRTITAFASQGRIMRLYEETLKGPRKQNIK
QSWFSGLGLFSSQFVTTAAISLAFWWGGREMNKGLVTAKEMFQVFFILMTTGKNIADAGS
MSSDISKGGGAVRSVLAILDRKSEIDPNDTKGLTIKRINGDIELKNVYFSYPSRPEQMIL
QGLSLRIEAGKTVALVGESGSGKSTVIGMIERFYDPMKGSILIDERDLKDYNLRDLRSHI
ALVSQEPTLFAGSIRYNIVYGKEEASEVEIRKAAKLANAHEFISSMKDGYETYCGERGVQ
LSGGQKQRIALARAILKNPAILLLDEATSALDSVSENLVQEALEKMMVGRTCVVIAHRLS
TIQKANSIVVIGNGKVLEQGSHSELLSMGNQGSYHSLIKLQHL
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaaggtggaatgttttattatgcagatggaatagataagcttcttttgtta
tttgggacaataggttccattggagatggattgatgtctcctcttactatggtgatcctt
agtggtgtgattgatgagtatggaactggtggcgtttctatttccaatgatgtggtggac
aagtatgggctcaagttgctcatccttgcaattggaatcgcaatatcggctttcattgag
gggatttgttggacaagaacagcagaacgacaaacgtcacgtttgaggatggaatatttg
aaatctgtattgaggcaagaagtcggcttttttgacacacaagttggatcttccaccaac
tttgaagttatcacagccatttctggtgatgctcaattgattcaggatgtcatggctgat
aagatacccaactgtctagctcacttatcagcactcttctttagtatcgtggttgccttc
acactttcatggcgactagccatagcttcgcttccattcgcgcttctctttgttgttccc
gttttaggcgttggggtgttactaaaaaaactagggatgaagatgcaaggtgcatataat
acaggcggtggggttgcagaacaagcaatatcatcaattcgaactgtttattcttatgtt
ggggagcaacaaacgattaataaatttagcaatgcacttcaaacaagtatggaattaggc
ataaaacaaggatttacaaagggtttgatgattggaagcatgggtatgatttttgttgct
tgggcgtttgttgcttgggttggaagttatcttgttattgagaaaggagaaagtggtggg
cgtgtgtttgttacagcaatttgtgttatcatggcaggactgtcagcaatgagtgcatta
cccaatgtcccattcatttcagatgcaacagctgctacaacaaaaatgtttgaaatgatc
tcaagaattcctcgaatagattctgaaaaccataaaggaaaaacatttccatctgtaagt
gggcacattgaatttaggaatgttgaattctcatacccatcaagaccagattctccaatt
cttcaaggacttaacctaaaagtaaaagctggaaagacaataggtcttgtaggaggcagt
gggtcaggaaagtcaacaatcatctctttgctcgaaagattttatgatccaataaaagga
gacattcttcttgatggacacagaatcaagggtcttcaacttaaatggttaagatctcaa
atgggcttggttaatcaagaaccagtactctttgcaacatcgattacagaaaacatactt
tttgggaaagaaggggtttcaaaagaatttattgaggttgcaactaaagcagcaaacgca
cataatttcatcgtgaatttacctaatggttatgaaacgcaagtgggacaatttgggatt
caattatccggtgggcaaaagcaaagaatcgccatagctagggctttgttgaaagaacca
aaaattcttctgttagatgaagcaactagtgcgttggatacagaatctgaaagagttgtt
caggaagctttagatcaggcttcaataggaagaacaacaattattatcgcacatcgattg
acaacaatccgtaaagcagataagattgtggttcttcaatcggggaaagtcattgaatcg
ggttcacatgatgagttaatgcagaagaacaatggagaagaaggtggagcatactaccaa
atggttcaattgcagcaatcggcaacacaaaatgaaaccttagattatactccttatacg
ccgatatcacaaagaaacttaaaccaccaacaccaaacacccacgactcctataagtgga
agatcaagctttcaaaatagcccaatgtcccccattagcccaacattaagcatggcacat
tcggttcaaatgtattcttatcaagaaagtgatgatgaatacttaatcgaaacacctgaa
tctagtccttcacaatggcgtcttttacagatgaatgctcctgaatggaagaacgcgttg
cttgggtgcttaggagcttctggtttcggagcgatatcaccaattcacgcttatttctta
ggatcagttgtgtctgtttactttttacccgacaagggaaaagtaaaatcagaaacagga
ttttattgcatcgtctttgtatgtcttggaattggttgcttcttcacgaatctcctccaa
cattataattttgcagttatgggagagcgattgacgaagagggtaagagagaaaatgctt
gaaaatgtacttactttcgaagttggatggtttgatcgcgacgaaaacacaagtgcagca
gtttgtgcgaggctagcaaccgaagctagcttgataaagtctctcgtcggagatcgcatg
tcgttgcttcttcaagtttttgtcagcgcgtttctttcttttcttcttgcattgataatc
acttggagagtttcaattgttatgattgcagttcaaccattgttaatcgcaagcttctat
tccaagattgttctaatgaaaaacctatctgcaaaagctaaaaaggcacaaaacgaagga
acccaattagcgagtgaagcagtggtgaatcacagaacaatcactgcgtttgcttctcaa
ggacgaatcatgcgattatatgaagaaaccctaaaaggtcctcggaagcagaacattaaa
caatcatggttttcgggtctagggttgttcagttcccaattcgtgacaacagcagcgatt
tctttagcgttttggtggggcggaagagaaatgaataaaggattggtaactgcaaaagaa
atgtttcaagttttcttcattttgatgaccaccgggaagaacatcgccgacgccggaagc
atgagttctgatatatcaaaaggtggtggtgcagttagatcagtgttagcaattctagac
agaaaaagtgaaatcgacccaaatgataccaaagggttaacgattaagagaatcaatggt
gatatagagctaaaaaatgtttacttttcctacccatcaaggcctgaacaaatgattttg
caaggtttgtctttaagaatcgaagctggaaaaacagtcgcacttgtgggagaaagtggt
tctggcaaatcgactgttattggaatgatagaaagattctatgaccccatgaaaggatct
atacttatagatgaacgagacttgaaagattacaacttgcgagatttaagatcacatatt
gcattagttagccaagaaccaactctttttgcaggaagtattcgatataacattgtatat
ggtaaagaggaagctagtgaagttgaaataaggaaagcagcaaagcttgcaaatgctcat
gagttcataagttctatgaaagatggatatgaaacttactgtggggaaagaggagttcaa
ctttcaggaggacagaagcaaagaattgcacttgcaagagcgatactaaagaatccggct
attcttcttttagatgaggctacgagtgcacttgatagtgtgtctgagaatcttgtacaa
gaagcattggagaagatgatggttggtaggacttgtgtggtaattgctcataggctatcg
actatacagaaagcaaactccatagttgtgattggaaatgggaaagttttagagcaagga
tcacattctgaactgctttcaatggggaatcaaggttcatatcactctcttataaagttg
caacacttgtaa
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integrated database retrieval system