Lactuca sativa (garden lettuce): 111877543
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Entry
111877543 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111877543
KO
K14856
protein SDA1
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsv03009
]
111877543
Ribosome biogenesis [BR:
lsv03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111877543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
111877543
NCBI-ProteinID:
XP_023729830
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All DBs
Position
8:289479695..289483894
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AA seq
773 aa
AA seq
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MPANAITADALSASGLTSEKLSLPTLPSKTKCHPDCYETELTLIYSQFKSSVELFQQQAA
LNFTSVVSGGVGSDPTIAKDLGDLAMFLAHVTPLYPNQLLHYPKELVEFLSSSARVLPSS
LRVTVTQALILLLNRKILAIKETLALFMELQILSDKPLKELASSHVIHSIRRMNQKHKNE
TENRALQSILFSMLQEEDEKKAMRSLVTVCDLHRRKIWFDDRTANAICWACFHPSSRIMI
AALSFLLDYEKIEQDNDSDESSDEEEAIHQSHVVVSKEAIYKAKNTGATSSKKKKKAKLQ
RVIRSMKKQQRISSERNDNSNYYSPLNALKDAQGFAEKLFSQLQTCSERFEIKMMMVKVV
ARTIGLHQLLVLNFYPFLQKFVQPHQKDVTNLLSAAVQACHDMVPPDAVEPLFKQIVNQF
VHNRSSTESIAVGLNVVREICLRIPLLMTEDLLQDLVLYKKSHEKAVSSAACSLISLFRG
ICPSLLIKKDRGRPTDPKAKPKAFGEVTVPSDVPGAELLLDDDVSNASDEDGESIDADIS
TDDGGLEFEEEEDDDEEMGSEEDEVSDDDDEEEVDGMCIDSRGSEKRKGQKRKFEDVDGE
VDVANQSLRARKRLAGAKLEGEATTTDGILSNKDFQRIKELKAKKEAKVALANHGMLKKS
SDLKSTTGFKVPTSPQLSLKRVDGFSLEANIRKKMTKEERKALIKAGREDGEKYQARAAI
KQKKSGGLSNRQKEHKKAMPLAAKRSKVERSRRQKKLKAKTAGKQFRGQKAWK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgaatgcaatcacggcggacgcgttgtcggcgtctggcctaacgtcggaaaaa
ctcagcctgcctacgcttccatcaaaaacgaaatgccaccctgattgctacgagaccgag
ttaaccctgatttacagccaattcaagtcgtctgtcgaactttttcaacaacaggcggca
ctaaatttcacctccgtcgtcagtggcggcgttggaagcgaccctaccattgccaaagac
ctcggtgacctggccatgttcttggctcacgttacgccattgtaccctaaccagctctta
cactacccgaaagagctcgtggaatttcttagttcatccgctcgcgtgcttccatcttcg
cttcgtgtcactgttacacaagctctgattcttcttcttaatcgcaagatccttgctatc
aaggagactcttgcattgttcatggagcttcagattttgagtgacaaacctttaaaagaa
ttggcatcctctcatgtcattcatagtatcaggcgtatgaatcagaaacacaagaacgaa
acagaaaacagagcacttcaaagtattttattctcaatgctacaggaagaggatgaaaag
aaagcaatgaggtcacttgtcacagtatgtgatcttcataggaggaagatctggtttgat
gatagaacagccaatgctatatgttgggcatgtttccacccatcatcaaggattatgatt
gcagctctgtcatttcttcttgattatgaaaaaattgagcaagacaatgacagtgatgag
tcaagtgatgaagaagaagcaatccatcaatctcatgttgtcgtgagtaaagaggctatt
tacaaggccaagaatacaggggcaacatccagcaaaaagaaaaagaaagcaaagttgcaa
cgtgtgatacgtagcatgaaaaagcaacaacgtatctcatctgaaaggaatgataactcg
aactactattcaccactcaatgctttgaaagatgctcaggggtttgctgagaagctattc
tcacaacttcaaacatgtagtgaacgttttgagataaaaatgatgatggtgaaagtggtt
gcacgtactattggacttcatcaattgcttgtattgaacttttatccttttcttcaaaag
tttgttcagccccaccaaaaggatgtgacaaacttactttcagcagctgttcaagcctgt
catgatatggtgccacctgatgcagttgaaccattattcaagcaaatagttaatcaattt
gtgcataatcgatcatctacagagtcaattgctgttgggttgaatgttgtgcgtgaaata
tgtttgcgtattcctctgttaatgacagaggatttgctgcaagatcttgtgctgtataag
aaatcacacgagaaggcagtttcatcagcagcttgttcacttatttcattgttcagaggg
atttgtccttcacttctgataaagaaggatcgtggtcggccaactgatccaaaagcaaag
ccaaaagcatttggtgaggttactgttcccagtgatgtccctggggctgagctacttctg
gatgatgatgtcagcaatgcttctgatgaggatggtgaatctatcgatgctgacatcagc
actgatgatggaggtttggaatttgaagaagaagaagatgatgatgaagaaatgggaagt
gaagaggatgaagtatctgatgatgatgatgaggaggaggtggatgggatgtgtattgat
tcaaggggatctgagaaaaggaaagggcaaaaaaggaaatttgaagatgttgatggagaa
gttgatgtggcaaatcaaagtcttagggctcgtaagagactagcaggagctaaattggag
ggtgaggcaacaacaacagatggtattctctcaaataaagattttcagagaatcaaagag
ctaaaagcaaagaaggaagcaaaagttgcattggcgaatcatggaatgttgaaaaaatct
tcagatctgaaatcaacaacaggctttaaggtcccaacttctcctcaactcagtttgaaa
agagttgatggattttcgcttgaagctaacataagaaaaaagatgacaaaggaggaaagg
aaggctttgatcaaagcaggaagagaagatggggaaaagtatcaagcaagagctgctatc
aagcagaaaaagagtggtggactaagcaatcggcaaaaggaacacaagaaggcaatgcct
ttggctgccaagagatcaaaggtggaaagatctcgccgtcagaaaaagctcaaggccaag
acagctggcaaacagtttcgtggtcagaaagcatggaaatga
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