Lactuca sativa (garden lettuce): 111877600
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Entry
111877600 CDS
T05352
Name
(RefSeq) axial regulator YABBY 5
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111877600
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
111877600
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Ortholog
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GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Microp_apicomplexa_22
Zn_ribbon_12
XAF1_C
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
111877600
NCBI-ProteinID:
XP_023729890
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Position
3:complement(4546510..4550407)
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AA seq
228 aa
AA seq
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MSISSTTTSPTVPQLLHHLPPPSCSDQLCYVQCTHCDTVLAVSVPCTSLFKTVTVRCGHC
TNLLPLSMPGLLLPPSVNQFHISHTNFFSPSNHTLLDDQIPTGGSNFLINPNYANEFSLT
ACGGFRELPKPPVTNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWA
HFPHIHFGLMPDQTTAVNKSSMRQQDHTDGGFMKDGFFASANVGVSPY
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtccatctcctccaccacaacctccccgaccgtaccacagctcctccaccacctccct
cctccttcatgctccgatcagctctgctatgtccagtgcactcactgcgataccgtcctc
gccgtgagtgttccttgcaccagcttgttcaagacagtgacagtccggtgtggtcactgc
acgaacctccttcccttgagcatgcctgggttgctgttgccaccatcagtgaatcagttc
catattagtcatactaatttcttttctccttctaatcatacgctgttggatgatcaaatt
ccgactgggggttccaactttctcatcaatccgaattacgcaaatgagttttcgttgact
gcttgcggaggatttagggagcttccgaaaccccctgtgactaatagacctccagagaag
agacagagagtcccctccgcctacaatcgattcatcaaggaagagattcaaaggatcaaa
gctgggaatcctgacattagtcatagagaagccttcagtgctgctgctaagaattgggcc
cactttccacacattcactttggtctcatgcctgatcagacgactgctgtgaacaagagc
agcatgcgccaacaggatcacacagacggtggtttcatgaaagatggtttctttgcttct
gcaaatgtgggcgtctctccttactag
DBGET
integrated database retrieval system
