Lactuca sativa (garden lettuce): 111877924
Help
Entry
111877924 CDS
T05352
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111877924
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111877924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
ARM_TT21_N
YfiO
Motif
Other DBs
NCBI-GeneID:
111877924
NCBI-ProteinID:
XP_023730198
LinkDB
All DBs
Position
5:264409150..264413266
Genome browser
AA seq
851 aa
AA seq
DB search
MNSSSKQLVGLGSALDKLIRSSSLHDHIPTVYLLHTRQGFPAQRPKEMQLSTTSRELSPF
IFPLSSIPSPGKSYTTPMRTALSLLRSLSTSLPRHHRRYLLIQRTFPLFKPHVVNPPRIS
LFCTRSAEQSSVSNFVEQLAGEDENLDFDKDNEVFNFDASFVSNVDSKNKHLSPSLDVKE
LDELPEQWRRSKLAWLCKELPAHKPATLIRILNAQRKWVNQEDMTYVAVHCMRIRENETG
FRVYKWMMQQHWFRFDFSLATKLADYMGKERKYLKCREIFDDIINHGLIPTEYTFHILII
SYLSSSNRGCLDEAFAIYNRMIQLGGYSPRLSLHNSLFKALLTQPEDSSKHYLHQAEFIF
HQMVTSGFKIHKDIYSGLIWLHSHQDKIDKERITSLRAEMELSGFDETKEVLISILRACS
KEGDINEAEKTWEKLLNITPTIPSQAFVYKMEVYSRIGEHMKSFEVFRGMQEQLGSASIA
GFHKIIEILCKSNSHELAESVMKEFIESGKKTLMPPFLDLMNMYLTLRMHDRLEYTFLQS
LEKCPPNRTLYNIYLKSLVDSMNLQKAEKTLREMQSHEAVGVDTESCNTILRGYLDGKEY
AKAEKIYTLMKEKKFHIEPDLIENLEHVLSSNEEAVKNPVILKLSKEQREALVGLLLGGV
QIESDEKGKNHTLVFKFNEDSGVHKVLKRHISYEYHEWLDSSNEQFTTIPHSYFGFYADQ
FWPQGQPAIPKLIHRWLSPRVLAYWYMYGGYKTSSGDILLKVKGSEDGVDRIVKTLQKKS
LTCKVKRKGRVFWIGLLGSNSEWFWKLVDPYIVRDLKDVLKPGNIASDLKEEAQNVEFDR
SDSDYSEDDIL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgtcgtctaaacagctggtcgggcttgggtcagcccttgataaactaattcga
agctcgagccttcatgaccatatccccaccgtttatcttcttcacacccgccaaggattc
ccagcacaaagacccaaggagatgcaactgagcaccaccagtcgggagctatcaccgttc
atctttcctctctcttctattccctcccctggtaaaagctacacgacacccatgcgcaca
gccttatccctcctccgctctctttctacctccctccctcgccaccaccgccgttatctc
ctcatccaacgcactttccccctctttaaaccccatgttgtaaacccacctcgaatttca
ctattttgtactcgttccgcggaacagtcatctgtcagtaatttcgtcgagcaattggcg
ggcgaagacgaaaacttggattttgataaagataacgaagtttttaacttcgatgcctct
ttcgtgtcgaatgttgattccaagaataaacatttatctccgtctcttgatgtgaaagag
ttggatgagctgcctgaacagtggaggaggtctaagttggcgtggttgtgtaaggagctc
cccgcgcataagcctgctacgcttattagaatactgaatgctcagcggaagtgggttaat
caagaagatatgacttatgtagctgtccattgtatgcggattcgtgaaaatgagactggg
tttagggtctacaaatggatgatgcaacagcactggtttcgttttgatttctctcttgct
acgaagctagcagattacatgggcaaggagcgaaaatacttgaaatgtagagagatattc
gatgatataatcaatcacggactaatccctacagaatacaccttccatattctcataatc
tcctaccttagttcatcaaatcgtggttgtttagatgaagcatttgcaatctacaatcga
atgattcaattaggaggttatagtccccgcctcagcctgcacaattctcttttcaaagca
cttctaactcagcctgaggactcttcaaaacactatcttcatcaagcagaattcatattt
catcaaatggtaacatctggattcaagattcataaagatatctacagtgggcttatttgg
cttcatagccatcaagataagatagataaagaaagaatcacatcactaagagccgagatg
gagttatctggatttgatgagaccaaagaagtgcttatctctattttgagagcttgttca
aaagaaggggatataaatgaagccgaaaagacatgggaaaagcttcttaatatcactccc
acaattccctctcaagcttttgtgtataaaatggaagtctattcaagaattggagaacat
atgaaatcattcgaggtatttagaggcatgcaagaacaattaggttcagccagcattgca
ggatttcataaaatcatagaaattttgtgtaaatcaaactctcatgagcttgcagaatct
gtcatgaaagaattcatcgaaagtggtaaaaagacattaatgcccccgtttcttgattta
atgaacatgtatttaacattacgcatgcacgataggttggagtatactttccttcagtcc
cttgagaaatgtcctcctaatcgtaccctttacaatatatatctcaaatcacttgtagat
tctatgaatttacaaaaagcagaaaagacactacgcgaaatgcaaagtcatgaggctgtg
ggtgttgacactgaatcttgcaacaccattttaagagggtatttagatggtaaagagtat
gcaaaagcagaaaagatttatactttaatgaaggagaaaaagtttcacattgaacccgat
ttgattgagaatcttgaacatgttttgagttcgaatgaagaagctgttaagaaccctgta
atcttgaagcttagtaaagaacaacgagaagctttggtgggattactattgggtggtgta
cagattgaatcagatgaaaaaggaaagaatcatacacttgttttcaagttcaatgaggac
tctggtgtacataaggtgttaaagagacatatttcctatgagtaccatgagtggttggat
tcatctaatgaacagtttaccactataccccactcttattttgggttttatgcagaccag
ttttggccacaggggcaacctgcaattcctaaattaatccataggtggttatcacctcgg
gttcttgcatattggtacatgtatgggggttacaagacatcatctggagatattttatta
aaggtcaaaggaagtgaagatggagttgaccgaattgttaaaaccttacagaaaaagtct
ttgacttgtaaggtcaaacgcaaggggagagtgttttggataggtttacttggaagcaat
tcagaatggttttggaaattggtggatccatatattgttagggatttgaaagatgtttta
aaaccagggaacatagcatcagatctaaaggaagaagcccaaaatgttgagtttgataga
agtgattctgattatagtgaagatgacatcttgtag
DBGET
integrated database retrieval system
