Lactuca sativa (garden lettuce): 111878066
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Entry
111878066 CDS
T05352
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00061
Fatty acid biosynthesis
lsv00071
Fatty acid degradation
lsv01100
Metabolic pathways
lsv01212
Fatty acid metabolism
lsv04146
Peroxisome
Module
lsv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
111878066
00071 Fatty acid degradation
111878066
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111878066
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lsv01004
]
111878066
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsv04147
]
111878066
Enzymes [BR:
lsv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
111878066
Lipid biosynthesis proteins [BR:
lsv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
111878066
Exosome [BR:
lsv04147
]
Exosomal proteins
Exosomal proteins of breast milk
111878066
Exosomal proteins of breast cancer cells
111878066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
ATPTG10
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
111878066
NCBI-ProteinID:
XP_023730354
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All DBs
Position
5:complement(265327661..265333532)
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AA seq
659 aa
AA seq
DB search
MSVYTIKVDDSRPAAGEMPSAGPAYRCIYAKDALMELPPGYDSPWDFFSESVKRNPKNPA
LGRRQIIDGKAGGYSWLSYQDAYNSAIKIASAIRTRSVNPGDRCGIYGTNSPEWIISMEA
CNCNGITYVPLYDTLGANAVEYIINHAEISLVFVQESKLAAVLSCVPNCSSNLKTIVSFG
NVSGSQKKEAMEQGVDCFSWEEFTSMGNLDDELPAKHKNDICTIMYTSGTTGEPKGVILN
NSTFMSEVLSVHQLLVETDKPATEEDTYFSFLPLAHIFDQIMETYCIYSGSSIGFWQGDI
RYLIEDLLVLQPTIFCGVPRVYDRIYTGIMAKISTGGAVKKALFDFAYNYKLRNLEKGIQ
QDKSAPLLDKLVFDKIKQGFGGRVRLMLSGAAPLPQHVEEFLRVTCCTVLSQGYGLTESC
GGCFTSIANVHSMIGTVGVPMTTIEARLESVPEMGYDALAPVPRGEICLRGNTLFSGYHK
REDLTNSVLVDGWFHTGDIGEWQPDGAMKIIDRKKNIFKLSQGEYVAVENIESTYSRCPL
VTSIWVYGNSFESFLVGVVVPDRLAIEEWAEKNGESGDFVSLCNNSNVRKYVLDELNSEA
QKNKLRGFEMLKAVHLEPVPFDFERELITPTFKLKRQQLLKYYKDCIDQLYSEAKTSKK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtttacaccattaaagttgacgattcaagaccggctgccggcgaaatgccgtct
gcaggtccggcgtacaggtgcatttacgccaaggatgctctcatggagttgcctcccggt
tatgactcaccctgggatttcttcagcgagtcagttaagagaaacccaaagaaccctgcg
cttggtcgtcgtcaaatcatcgatggaaaggccggtggttattcatggctatcatatcaa
gatgcctacaattctgctatcaaaattgcatccgccatccgaacacgatctgttaatcca
ggagatcgatgcggcatatatggaactaacagtcccgaatggataatttcgatggaggct
tgtaactgcaatggcataacctatgtgcccctatatgacacacttggtgctaatgcagtt
gagtacatcatcaaccatgcagaaatttccctagtttttgttcaagagagcaagttggct
gctgtattatcatgtgttccaaattgctcatcaaatctaaaaactattgtgagctttggg
aatgtttctggatcacaaaagaaggaagccatggaacaaggtgttgattgcttctcatgg
gaagaatttacttcaatgggaaacttggatgatgaactccctgcaaaacataaaaatgac
atttgcacaataatgtatacaagtgggacaactggagaaccaaaaggagtcatactaaat
aactctactttcatgtctgaagtcctatctgtacatcaactacttgtagaaacagacaaa
cctgccacagaagaagatacctacttctcttttcttccattagcacatatatttgatcag
ataatggagacatattgcatctacagtggttcctcaatagggttttggcaaggagatatc
agatatttgattgaggaccttcttgtgttacaaccaaccatattttgtggtgtcccacgt
gtttatgaccgcatttacactggtataatggccaagatttcaaccggtggtgctgtaaaa
aaggcattattcgactttgcatacaattataaattgaggaatcttgaaaagggtatccaa
caagacaaatccgcccctcttctggacaagctggtcttcgataagatcaaacaagggttt
ggaggacgtgttcgtcttatgttatctggagctgcacctttaccacaacacgttgaggaa
tttttaagagtcacatgttgcactgtcctctcacaaggatacggtcttaccgaaagttgc
ggtggatgttttacatccatagcaaatgtgcattccatgatcggaaccgttggtgtccca
atgacaacaattgaagcaagactagaatcagtgcccgaaatgggatatgacgctcttgcc
cctgtgccacgtggcgaaatttgcttgaggggaaacactttgttttcagggtaccataag
cgagaggatcttacaaactctgtccttgtggacggctggttccatactggtgatattggg
gaatggcaacctgatggagcaatgaaaattatcgacaggaaaaaaaatatatttaagttg
tcacaaggggaatatgttgcagttgaaaacattgaaagcacgtattcacgttgccccttg
gtaacctcgatttgggtgtacggaaatagttttgaatcttttctagttggtgttgtggtg
ccggatagattggcgattgaagaatgggcagaaaagaatggcgaatcaggggattttgtg
tcgctgtgtaacaactcgaatgttagaaaatatgtccttgatgagcttaattctgaagct
cagaaaaataaacttcgtggttttgagatgctgaaagcggttcatttggagccagttccg
tttgactttgaaagggaattgataactcccacttttaaactgaagaggcagcagctccta
aaatattacaaggattgcattgatcaactatatagtgaagcgaagacatctaagaaatga
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