Lactuca sativa (garden lettuce): 111878168
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Entry
111878168 CDS
T05352
Name
(RefSeq) autophagy-related protein 11 isoform X1
KO
K08330
autophagy-related protein 11
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111878168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111878168
03029 Mitochondrial biogenesis [BR:
lsv03029
]
111878168
Membrane trafficking [BR:
lsv04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
111878168
Mitophagy
Scaffold proteins
111878168
Mitochondrial biogenesis [BR:
lsv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
111878168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
DUF8429
ubiquitin
FliD_C
Motif
Other DBs
NCBI-GeneID:
111878168
NCBI-ProteinID:
XP_023730447
LinkDB
All DBs
Position
5:222387945..222393309
Genome browser
AA seq
1034 aa
AA seq
DB search
MSSTENVIQRGKLLVHIAENGHSFELDCDEDTLVESVQQYLESLSGIRLNDQLILYLDLK
LEPQQPLSAYKLPSDDREVFLFNRAKMRTNSTPPSPEEPEVAENYHPDPPPPSSSHDPHP
LDEASDPALKALPSYERQFRYHYQLGDAIYRCTLMKYEASERISRKHRVQEKALEIARGN
LDHFYKMILQNYTDFVRCYSQQQRTHSNLLVNFGRDLERLRSIKLLPVLQSGDRKCLLDF
VKEDNLRKMVDDCSNSHRQFESKVGEFKQEFGELKRSTECLFSSKASILGRDLERTVKEH
QHHINEQKSIMQALSKDVGLVKKLVDDCLTSQLSNSLRPHDAVSALGPMYEGHDKSYIPK
MQACERAISNLLTFCKNKKSEMNTFVHKYMQKIAYIQYTIKEIRNKFSLFTEALKRQNDQ
FDHLKVIRGIGPAYRACLAEIVRRKSSMKLYMGMAGHLAEKLASKREIEIRRREEFLKVH
SSYIPRDILASMGLYDTPNTCDVNIAPFDGNLLDIDVSDIDRFAPEHLVGLSFKKGVEET
SESGNDFIEASELVEIAGTSKIEVENAKLKAELASTIALLCSFSPEIEFESLDDSKVGDL
LKNATEKTAEALRLKDEHEKHLLSMLKTKHLQCESYEKRIKELEQRLSDQYTLEVKLNKD
ESTGKTGDSKSEIFSPMDEASYGSNTHLDSSMPDEKDEKEAMVASSSGDYMPEKSFPAKG
DSGGGGDVVELQSLVAEKTNEVNEMEIKLREAVDEIARLGNELEISRNLLDESQMNCAHL
ENCLHEAREEAQTHLCAADRKASEYTALRASAVKVRTLFERLKTCVSSAGVAGFADSLRA
LAQSLATCANENSDDGVAEFRECVRVLAEKVGVLTRQRAELIDRYTKAEASHEELTKELN
EKKELVNTLYVKLQSEKQVNKEKISFSRLELHEIAAFVLNNVSGHYEAINRNSAHSHYFL
SSESVALFADHLPNRPTYIVGQIVHIEKQIVKSSPGRPTGLNPYGLPGGVGCEYFVVTVA
MLPDTTIRSPTAAS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaactgaaaatgtaatacaaaggggaaaacttctagttcatatagcagaaaac
gggcattcatttgagcttgattgtgatgaagacacccttgttgaatctgtccaacaatat
cttgaatccctttcaggaattcgcttaaatgatcaacttattctctatttggatttaaaa
ttagaacctcaacagccactttctgcatacaaactcccatcagatgatcgagaggttttc
ttattcaatcgagccaaaatgagaaccaattccaccccaccaagccctgaagaacctgaa
gtagctgaaaattaccatcctgaccctccacccccatcttcttcccatgatccacatcca
ttagatgaagcctctgatcctgctttaaaggctttaccctcatacgaaagacaatttaga
taccattaccagcttggagacgcaatttaccgatgtacccttatgaaatatgaggccagt
gagcggatttcaagaaagcatagggtgcaagagaaggcactggagattgccaggggtaat
ttggaccatttctataagatgatcctacaaaactacactgatttcgtgaggtgttattct
cagcagcaaagaacacattcgaatttgttggtgaattttgggagggatttggagaggcta
aggtcaattaaacttcttccagtgttacagagtggtgatcgaaagtgtttgttggatttt
gtgaaagaagataatttgagaaaaatggtggatgattgtagtaattctcatagacagttt
gaaagtaaagttggagagtttaagcaggaatttggagaattaaagagaagcaccgagtgt
ttgttttctagtaaagcttcaattcttggtagagatttggagagaactgttaaggagcac
cagcatcatattaatgagcagaaaagcataatgcaggctttgagcaaagacgtgggctta
gtgaaaaaactcgtggatgattgtttgactagtcaactctccaattcccttcgtccacat
gatgctgtttctgcattgggccccatgtatgaaggtcatgacaaaagctacatccccaaa
atgcaagcatgtgaacgtgccatttccaaccttctcactttctgcaaaaacaaaaaatct
gaaatgaacacttttgtacacaaatacatgcaaaaaattgcatacattcaatacaccatc
aaagaaatccgcaacaaattctcacttttcaccgaagccctaaaacgccaaaatgaccaa
tttgaccatttaaaagtcatccgtggcatcgggcccgcataccgtgcttgtttagctgaa
atagtgagaagaaaatcctccatgaagctttacatgggaatggctggacatttagctgaa
aaacttgcatccaaaagagaaattgaaataagaagaagagaagagtttttaaaagttcac
agttcgtatattccaagagacattttagcttcaatggggctatacgatacgcccaacaca
tgtgatgtgaatatagctccatttgatgggaatctactcgatattgatgtatcggatatt
gaccgttttgcccctgagcatctagtggggctttctttcaaaaagggtgttgaggagact
tccgaaagtgggaatgattttatcgaagcttctgaattggttgagattgctggaactagt
aaaattgaagttgaaaatgcaaaattgaaagctgaattagcttccacaattgccctcctt
tgttccttttcacccgaaattgaattcgaatcacttgatgatagtaaagtaggcgatttg
ctaaaaaacgcaactgaaaaaactgctgaggcgttacgtttgaaagatgaacatgaaaag
catttgttatcaatgctaaaaacgaaacatttgcagtgtgaatcatatgagaaaaggata
aaggaactcgaacaaagactttcggatcagtatactctagaagtcaaactcaataaagac
gagtcaaccgggaaaaccggggattcaaaatcggaaatcttctctcctatggatgaggct
tcttatgggtcaaatacgcatctggattcatcgatgccggatgagaaagatgaaaaggag
gcgatggtggcgagctctagcggcgattacatgccggagaaaagttttccggcgaagggc
gacagcggtggtggtggtgatgttgtggagttgcagagtttggtggctgagaagacaaat
gaagtaaatgaaatggaaataaagctccgggaagctgtggatgagattgcaaggctgggt
aatgagttggaaatcagccggaatcttctagatgaatctcagatgaattgtgctcactta
gagaattgtttacacgaagcaagagaagaagcgcagactcatctatgtgcagctgaccgt
aaagcatcggaatacaccgcgttacgtgcctcggcagttaaagtacgcacgcttttcgag
aggttgaaaacgtgtgtttcctctgctggtgtggctggttttgctgactcactacgcgcg
ttagctcaatctcttgccacttgtgcaaatgagaatagtgatgatggtgtggcggagttt
cgtgaatgtgtgcgcgtgttggctgagaaagtgggagtgctgactaggcaacgagccgag
ctaatcgataggtacacaaaggcggaggcatcacatgaagagctcacaaaggagttgaat
gaaaagaaagaattggtcaacactttgtatgtcaagcttcaatccgaaaaacaggtgaac
aaggagaagatatcattcagtcgtttagagcttcatgagatagcggcatttgtacttaac
aatgtatcaggccactatgaagctatcaaccgaaactctgctcattctcattactttctt
tcttcggaatctgtcgccttatttgctgatcaccttccaaaccggcccacatacattgtg
ggccagatcgtgcacattgagaaacaaattgtaaaatcgtccccgggtcgacccacgggt
ttgaacccgtatgggttaccgggtggggttgggtgcgagtactttgtggtgactgtagcc
atgttacctgacacaaccattcgttcgcctactgctgcttcctga
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integrated database retrieval system
