Lactuca sativa (garden lettuce): 111878257
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Entry
111878257 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111878257
KO
K24260
WD repeat-containing protein 11
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111878257
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsv03037
]
111878257
Membrane trafficking [BR:
lsv04131
]
Endosome - Lysosome transport
Others
Others
111878257
Cilium and associated proteins [BR:
lsv03037
]
Other cilia and associated proteins
Other cilium assembly proteins
111878257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
Beta-prop_WDR11_1st
TPR_WDR11
WD40_CDC20-Fz
TPR_GEMI5
WD40_Prp19
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
111878257
NCBI-ProteinID:
XP_023730534
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All DBs
Position
8:90997189..91003915
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AA seq
1317 aa
AA seq
DB search
MSLVQRQPTDSSDCMLPGPPSRNNGGSADLVSTGLLAYAAGSTVPILDTRSMQLVCVFPI
PPPVATSGTSSTSSSSSLSPYVTSVRWCPTSLRLDLLSHDLSSSHSHLLLAAGDRQGRIC
LLDLRQKSAPLLFLQTDQNSKLGIQDLCWIQARSDSWIIAALMGSSLLALFNIPTGRCFF
KYDASPEIFSCIKRDPFDSRHLCVISLKGLLLSIKVLGDVSDSDVVLEELKIPTDVSELN
KLEREVGIGVGSAATLSNSPATATLPTYAVKLAFSPHWRHILYVTFPRELIVFDLQYETA
LSHSSLPRGCGKFLDVLPDPSMELVYCAHLDGRLSAWRRKEGEQVHEKCMMEELMPSIGT
SVPTPSVLAVVISQSDATLQNVGKHFSDGHQPSSPDNEFDLDFDNPFDFRDDSHIICRTH
FISISDDGKIWNWLLTSEDPTDNPKDTSDPAHVTEVRKDPSASTVSQDKLTLKISLVGQL
HLLSSTLTLLAVPSPSLTATLASGGNHPAVAVPLVALGTQNGSIDVIDVSANAVAASFSV
HNNLVRGLRWLGNTRLVSFSYSPGSEKSGSYVNRLVVTCLRSGHNRAFRVLQKPERASIR
ALRVSSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPTVPRPSHSGASRQ
SVSNSQDNTSAASEGASTDTNGAQEDFTETFSFGLVNGSCGVFEVHGRRIRDFRPKWPDS
SFVSTEGMVTAMAYRMPHVVMGDRLGNVRWWDVTTGQSSSFNTHKEGIRRIKFSPVVPGD
RSLGRIAVLFNDNTFSVFDLDSQDPLANSLLQTRFPGTLVLELDWLPVRTDKNDPLVLCI
AGADSSFRLVQVNIDKKSGYDAQPGSVKERFRPMPLCSPVLLPTPHALALRLILQYGVKP
SWFNTCGSIPDKGGDSDSQISRSSSASVGDLRSYLIDLSPIGDSVVPELLLKALEPYRRE
GCVLDDERVRQYGSIVNKGCAARFSFAAAIFGETLEACFWLQLPRALKHSLNMLATKSLQ
KAPVKLPSTIDESSVLSRMFTMKRRSVPRLTNSNSLSNGELRMMAFAQEELWENASERIT
WHENLEGEQAIQNQVHELVTVGNLDAAVNLLLSTPPESSFFYPNALRAVALSSAVSRSLN
ELAVKVVAANMVRTDRSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLKGSDYS
RVMQRWAGHVLNTEHNMWRALIMYVAAGCLQEALAVLCEAHRPDSAAMFIIACREIHGEF
IEGLDPNDDASATIKEKLVVLRGLNPESEEVIGVGELYTKYQQELVHLCMDSQPYSD
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttggttcaacgacaaccgaccgattcgtcggactgcatgctaccgggaccaccc
tcccgcaacaatggtggatccgctgacctcgtatcaaccggcctcctcgcatatgccgcc
ggtagcaccgtccctatcctcgatactcgctccatgcaactcgtctgcgtctttcctatc
cctcctcctgttgccacatccggcaccagcagcacatcctcctcctcctcactgtcccct
tatgtcacctccgtccgttggtgccctacctcgctccgtctagaccttctctctcatgac
ctttcttcgtcccactctcaccttctcctcgccgccggcgaccgccaaggccgtatttgc
ctcctcgatcttcgccagaaatcagcccctctgctcttcctccaaaccgatcagaactcc
aaacttggaatccaagacctttgttggatccaagcccgatccgactcatggataatcgct
gccctaatgggatcatcactcctcgctcttttcaacatccccaccggacgttgcttcttc
aaatacgatgcatcgccggaaatcttctcttgtattaaacgtgaccccttcgattcccgc
catttatgcgtcataagtttaaaaggccttctcttgtcaatcaaagtccttggggacgtg
tctgattctgatgtcgtattggaagaactcaaaatccctaccgatgtctctgagttgaat
aagcttgagagagaagtcggtatcggcgttggttcagccgctacacttagtaattccccg
gcaacggcgacgcttcccacttatgcagtcaaactcgcattttcgcctcattggaggcac
attttgtatgttacttttccgagggaattaatcgtgtttgatctgcagtacgaaacggct
ctgtctcattccagtttaccgagaggatgtgggaagtttctcgacgtgttgccggaccca
agtatggagctggtttactgtgctcatctcgacggccggcttagcgcttggcggcgaaag
gaaggagaacaggtgcacgaaaagtgtatgatggaagaattgatgccctcaattggcaca
tctgtcccaactccctcagttcttgcagttgtcatctctcaatcggatgccaccctccaa
aatgtcggcaagcatttttccgatggacatcaaccttcatctcctgacaacgaatttgat
ctggattttgataatccttttgatttccgtgatgattcacatatcatttgtagaacacat
tttatatccatttcagatgatggaaagatatggaattggcttctgacttccgaagaccct
acagataatccaaaagatacatctgaccctgcacatgttacagaagtccgtaaagatcca
tcagcctctactgtaagccaggataagctaacactcaagatcagtcttgttggccaactt
catctcctttcttcaacattgacattgttggctgttccttctccttctttgacagcaact
ttggcaagtggtggaaaccatcctgctgtggctgttccacttgttgctttgggaactcaa
aatggttcgattgatgttattgatgtttctgcaaatgctgtagctgcaagtttttctgta
cataataatcttgtaagaggattaaggtggcttggaaacactagacttgtctcattctca
tatagtccgggaagtgagaagtctggaagctatgtgaataggcttgttgttacatgcctt
cggagtggtcataatcgagcatttagggttttacaaaagcctgaacgtgcatcaattaga
gctctacgtgtgtcatcttccggaaggtatcttttgatcttgtttcgtgatgcacctgtg
gaggtttgggcaatgacaaagactccaattatgcttaggtctttagctcttccattcaca
gttttggagtggactcttcctactgttccacgtccctctcacagtggagcctctaggcaa
tctgtatctaattctcaagacaacacttctgcagcatctgaaggagcctctacagacacc
aatggagctcaagaagattttacagagaccttttcatttggtttagtaaatggctcttgt
ggggtgtttgaagttcatggacgaaggatccgagatttcagaccaaagtggcctgactcc
tcttttgtttctactgaagggatggtgacagctatggcttatcgtatgcctcatgtggtt
atgggggacagattaggaaatgtaaggtggtgggatgtgacaactggacaatcttcctct
ttcaacactcacaaagaaggcattagaagaattaaattctcccctgttgttcctggagat
cgcagccttggacgtattgctgttttgtttaatgacaacacattttctgtgtttgatctt
gattcacaggatcctttagccaattccctattacagacacggtttccaggaacacttgtg
ttggagcttgattggttacctgtacgaactgacaaaaacgatccattagtattgtgtatt
gctggagctgatagtagctttcgtcttgttcaggttaacattgataaaaaaagtggttat
gatgcccaacctggatctgtgaaggagcgatttaggccaatgcctttatgttctcctgta
ttacttcctacaccacatgccttagcattgcggttaatcttgcaatatggggtaaagcct
tcatggtttaacacatgcggttcaatcccagataaggggggagattcagattcccaaata
tcaagaagttcatcagcatctgttggagaccttcgtagttatttaattgatttatcacct
attggtgactctgttgtccctgagttacttcttaaagcattagagccttaccgaagagaa
ggctgtgtgcttgatgatgagagggtgagacaatatggtagtattgtgaataaaggttgt
gctgcaaggttttcttttgcagctgcaatatttggtgaaactttggaggcttgtttttgg
ttgcaattgcctcgtgcattaaagcactcactgaatatgttggctacaaagtctttgcaa
aaagcacctgtgaaattgccatctaccattgatgagtcatctgtactaagtaggatgttc
accatgaagagaagatctgtaccaaggttaacaaactcaaattcactcagtaatggtgaa
cttaggatgatggcttttgcacaagaagagttgtgggaaaatgctagtgaacgtattact
tggcatgaaaacttggagggtgaacaagctattcaaaaccaagtccatgagctagtgaca
gttggtaacttggatgctgctgtgaatttacttctttcaactcctccagagagctccttc
ttctacccaaatgctttgcgtgctgttgctctttcctctgcagtctcaagatctttgaat
gaactcgcagttaaggtggttgcagcaaatatggtgaggactgacaggtcattatctggc
acacacctcctctgtgctgttgggagatatcaagaagcttgttcacagttgcaagatgca
gggtgttggacagatgctgcaaccttagcagcaacacatttaaaaggaagtgattattca
agggtaatgcaaagatgggcaggacacgtgttaaatacggaacataacatgtggagggcc
ctaataatgtatgtagcggcgggatgtttacaagaagcattggcggtgctgtgtgaggct
catcgaccagatagcgcagcgatgttcatcatagcctgccgggaaattcatggggagttt
atagaggggttagatccaaacgacgacgcatctgccacgatcaaggaaaaattggttgtg
ttacgaggattaaacccagaaagtgaagaagttatcggtgtcggggaattatacacaaaa
taccaacaggaattagttcatctctgcatggattcacaaccatattccgattaa
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