Lactuca sativa (garden lettuce): 111878286
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Entry
111878286 CDS
T05352
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111878286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111878286
Spliceosome [BR:
lsv03041
]
Common components
Common spliceosomal components
SR proteins
111878286
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
111878286
NCBI-ProteinID:
XP_023730557
LinkDB
All DBs
Position
6:complement(183041311..183044521)
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AA seq
233 aa
AA seq
DB search
MSHFGRAGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYADEAQKAVEKLDGRVVDGREMMVQFAKYGPNAEKIHKGRILEPVEKLKGRSRSR
SPRPSSRYRDEYSHRGYRRRSRSRSRERYYGRDRDRYRSRSRSPDYHRRHRRNRYDDDYD
DERSPSRSPVRSRSPPPRRTPSRSRSPVRGRNEKASSPGADSRSPLQRSDSDE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattttggtagagcaggccctccagatatcacagatacctattcgcttctcgtg
cttaacatcactttccgtactactgctgatgatttgttcccactttttgataaatatggg
aaagtggttgatgttttcatccctagagatcgcaggactggagattctcgtgggtttgct
tttgttcgatacaagtatgcagatgaagcacaaaaggcagtcgaaaagcttgatggaaga
gttgttgatggaagagagatgatggttcaatttgccaaatatgggccaaatgctgaaaaa
attcacaagggaaggatacttgaaccagtagaaaagctgaagggtagatcaaggagccga
agtccaagaccaagttccaggtatagagatgaatacagccacaggggctacaggaggaga
agtcgcagcagaagcagggagagatattatggaagggacagagatcgttacagaagtagg
agtaggagccctgattatcatagaagacacaggaggaacagatatgatgatgattatgat
gatgagagaagcccaagtaggtctcctgtaagaagcaggtctcctcctccacgtaggaca
ccttctagaagcagaagcccagttagaggaagaaatgagaaagcatcatcacctggagct
gattccagaagccctttgcagcgttctgattccgatgaatga
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