Lactuca sativa (garden lettuce): 111878389
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Entry
111878389 CDS
T05352
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111878389
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111878389
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsv04040
]
111878389
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111878389
Membrane trafficking [BR:
lsv04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
111878389
Ion channels [BR:
lsv04040
]
Chloride channels
Chloride channel (CLC)
111878389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
DUF7514
Motif
Other DBs
NCBI-GeneID:
111878389
NCBI-ProteinID:
XP_023730658
LinkDB
All DBs
Position
7:complement(134442709..134447138)
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AA seq
769 aa
AA seq
DB search
MDHNVDIEYEGGGKMSRNGSASDERGMNRQPLLSKNRVNTSSQIAIVGSNICPIESLDYE
ILENDLFKQDWRSRKKVEIFQYVVLKWTLALLIGVLTGLVAFFNNLGVENIAGFKFLLTS
KFMLQHRYYEAFAVFAGINLFLALLAGLLCAYIAPAAAGSGIPEVKAYLNGIDSHSILAP
STLFVKIFGSILGVAAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLTWKWLRYFKNDRD
RRDLITCGSAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRSLIGF
CRSGKCGLFGEGGLIMFDINGTIPDYNMVDLVAVILIGVIGGILGSLYNYFVDKVVRTYS
YINGKGPMIRVFLVGLISLLTSCCAYGLPWFTNCVPCPVGLSVECPTVGRSGSYKFFQCQ
PGHYNDLASLLLNTNDDAIRSLFGSTNANEFRISTLAIFFLAMYILGIITYGIAIPSGLF
IPVILAGSSYGRLVGTLLVSISNLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNNLL
MLPLMMLVLLISKSVADNFNKGVYDQIVRMKGLPFLEAHAEPYMRHLVAGDVVSGPLITF
SGVEKVSNIVHSLRMTSHNGFPVIDEPPFMEAPELCGVVLRSHLIVLLKGKMFTKQRRLT
GTEALQRYHAFDFAKAGLGKGPKMEDLDVTPEEMEMYVDLHPITNTSPYTVVETMSLAKA
AVAFRELGLRHLCVVPKTPGRPPVVGILTRHDFMPQHILGLYPGIDKRH
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggatcataatgttgatatagaatacgaaggaggtggaaagatgtcgagaaacggatcg
gcttctgatgaaagagggatgaacagacaaccgcttctttcgaagaacagggtgaatacg
tcatcgcagattgccattgttggttcaaacatttgtccaatcgaatctctagattacgag
attcttgaaaacgatctttttaagcaggattggaggtcaaggaagaaggtggagatattt
cagtatgttgttctaaaatggacacttgctcttcttataggagtgcttacagggcttgtt
gcctttttcaataaccttggagtagaaaacattgctggtttcaagtttcttctcactagc
aagtttatgctccaacatagatattatgaggcatttgctgtatttgctggaattaatcta
tttcttgctcttcttgctggacttctatgtgcttatattgcccctgcagcagcagggtct
ggtatacctgaagttaaagcttatcttaatggaatagattctcattctattttggctcca
agtacactcttcgtaaagatatttggatccatacttggtgttgccgctggatttgttgtg
gggaaagaaggacctatggtacacacaggtgcttgcatagcaaacttacttggacaagga
ggctctcgcaaatatcatctcacgtggaaatggcttagatactttaaaaatgatcgtgac
cgcagggatttaatcacctgtggctcagccgcaggtgtagcagccgctttccgggcccct
gttggtggggtcctctttgcccttgaagaagcagcctcatggtggcggagtgctcttttg
tggagaacattttttacaaccgctgtagtggctgtggtgttgagatctcttattggattt
tgtagaagtggaaagtgtggactgtttggggaaggtggtctcatcatgtttgatatcaat
ggtacaataccggattacaacatggtggatcttgtagctgttatactaattggagttatc
ggaggaatcttgggaagtttatataattattttgttgacaaggtcgtgcgtacttacagc
tacatcaatgggaaaggtcctatgattagggtgtttttggtgggtttgatttcactttta
acctcttgttgtgcttatgggcttccatggttcacaaactgtgtcccatgcccggttggg
ttaagtgttgaatgccctacagtcggtcgctccggtagctacaaattctttcaatgtcaa
cccggtcactacaacgatctcgcttcccttctgctcaacacaaacgatgacgccatccgc
agtctattcggttccaccaacgcaaacgaattccgtatctctaccctcgcaatattcttc
ctcgccatgtacatcctcggaatcataacctacggaatcgcgattccctccggtctcttc
attccggtcatcctcgcaggatcatcctacggccgcctcgtcggaaccctactcgtttcc
atctcaaatctcgacgtcggcctcttcgccctcctcggtgccgcctcgttcctcggcggc
acaatgcgaatgaccgtatccctatgcgttatactgctcgaactcacgaacaatctctta
atgctaccgttaatgatgctcgttcttctcatttcaaaatccgttgcggataatttcaat
aaaggcgtttacgaccaaatcgtaagaatgaaagggctaccgtttcttgaagcgcatgcg
gaaccatatatgcgacatttggttgcgggtgatgttgtttccggacctttgataacgttt
tccggagttgaaaaagttagtaatattgtacattcgctaaggatgacgtcacataatggt
tttccggtgattgatgagccgcctttcatggaagctccggagttgtgtggggttgttttg
aggtctcatttgattgttttgcttaaaggaaagatgttcacgaaacaaagacgtttgacc
ggaaccgaagcgttacaaagataccatgcgtttgattttgcaaaagcggggttaggaaaa
gggcctaagatggaagatttggatgttacaccggaagagatggagatgtatgttgacctt
catccgattaccaatacgtcaccgtatactgtcgtggaaacaatgtctttggcaaaagct
gcggttgcttttagggaactcggacttagacacttgtgtgtagtgccaaagactcctggg
aggccaccggttgttggtatcttgacacgtcatgatttcatgccacaacacattttggga
ctgtacccggggattgacaagcggcattga
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