Lactuca sativa (garden lettuce): 111878393
Help
Entry
111878393 CDS
T05352
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00270
Cysteine and methionine metabolism
lsv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
111878393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111878393
03032 DNA replication proteins [BR:
lsv03032
]
111878393
03036 Chromosome and associated proteins [BR:
lsv03036
]
111878393
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lsv02048
]
111878393
Enzymes [BR:
lsv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
111878393
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
111878393
DNA replication proteins [BR:
lsv03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
111878393
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111878393
Prokaryotic defense system [BR:
lsv02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
111878393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
111878393
NCBI-ProteinID:
XP_023730663
LinkDB
All DBs
Position
7:complement(133991547..133999474)
Genome browser
AA seq
1569 aa
AA seq
DB search
MGTARLLDSEESGAVKPTEMKKKGKQAKVKATAEASDVTMEDKTKVAKSTKPKPKRGRLN
NTENAPVSRKMPKRAASCTDFKTKSVRLSEKSSTIENKKVKVVEEEIAALSLVPGPDDPR
PNRRLTDFIFHDADGNPQPVEMLEVDDLFISGLILPLEKTSEKETGVRCEGFGRIEDWSI
SGYEDGSPVIWVSTELADYDCVKPSGSYKKLFDLFQEKANACIEVYKRLSKSSGGNPDLS
LDELLAALVRSLSGSKNFPHGASIRDLIVSWGGFIFDQLVSLDEMPEGADRAFVELPVLA
ALRDESKKHEACVGVKIPSGASLNAPLKIGDGEKVNNSNGGDEDEDMKLARVLQENENWQ
SLKQKKRGRQGNSSSKLYIQINEDEIANDYPLPAYYKSDIQETDEYLIFDDSDTVDSDQL
PRSMLHNWSLYNCDSRLISLELLPMKPCADIDVTVFGSGTMTADDGSGFCLDNDTSGSSG
STDQLNEDGIPIYLSAIKEWMIEFGSSMVFISIRTDMAWYRLGKPSKQYAPWYQTVLKTA
RLAIAIITLLKEQTRASKLSFSEVIKRLSEFEKSNPAHISSNPAIVERYVVVHGQIILQQ
FAEFPDDTIRRCAFVSGLEDKMEQRHHTKWLVKKKAILTKAENMNPRAAMGPVVSKRKAM
PATTTRLINRIWGEFYSNYSPEVKEGDLINVKKDDEEEEQELEENENEDCEEPEEESITL
PQESEKPNSATKQKKTKSSKTDISWVGKSIGKMPGGKNLYKSAVIRGEVVALGGSVAVEN
PKSDDDSIYYVEYLFEDSDSRKFVHGRLMLRGKETVLGDIASEREVYLTNDCLDFELDDV
IQTVVVQTRTLPWGHQHRKANASFDKADRAKAEERKNKGLPVEFYCRSLYWPERGAFFSL
KTDKMGLGNGMCDSCGIMEDENKKEVFEVNESKTGFMYMATKYDVDDFVYVGSYHFESDE
RGNETHKGGRNVGLKAYVICQLMKIETPKNSKLNDPDSVMLQVRRFYRPEDLSLDKAYRS
DIQEVYYSEEVHKLEVSAIEGKCEVRRKKDLSSQDTTYIFDHVFFCERLYDPKKGSLKQL
PVNIKLSPPKETPANEAAIRKRKGKSKEGENDDVEMTETKEGFTSKNILATLDIFAGCGG
LSEGLTKAGASVTKWAIEYEEPAGDAFRLNHPEALAFVNNCNVILKAIMAACGDVDDCIS
TTEADEQAAKLDEDMIKNLPRPGQIDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFL
SFAEYFRPKYFLLENVRNFVSFNKGQTFRLALASLLEMGYQVRFGILEAGAFGVSQSRKR
AFIWAASPEEILPEWPEPMHVFASPELRVSLNGNSQYAAARSTASGAPFRAITVRDTIGD
LPPVGNGASNPTIEYKNEPVSWFQKRIRGDASVLTDHISKEMNELNVIRCQRIPKRPGAD
WRDLPAEKVKLSTGQMVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSITDPQPMGKV
GMCFHPDQDRILTVRECARSQGFPDGYKFSGNIQHKHKQIGNAVPPPLAYALGRKLKEAL
EIKQKQLSK
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgggaacggcgaggctgttagattcggaagaaagtggtgccgtgaaaccaacagaaatg
aagaaaaaaggcaaacaagccaaagtcaaagctacagctgaggcatccgatgttacaatg
gaagataaaacaaaagtagccaaatccaccaaacctaaaccaaaaagaggaagattaaac
aacactgaaaatgctccagtttctagaaagatgccaaaacgagctgcttcatgtactgat
ttcaaaaccaaatcagttcgcttatcagaaaaatcttcaacaattgaaaacaaaaaagtc
aaagtggtggaagaagaaatagcagccctaagtttagttcctggacccgatgatccaaga
cccaatagaagattaaccgattttatctttcatgatgctgatggcaacccacaacctgtt
gaaatgctagaagttgatgatttattcatatctggcttaattcttccattagaaaaaact
tctgaaaaagaaacaggtgttcgttgtgaaggatttgggcgaattgaagattggtcaata
tccggatatgaagacgggtcacccgttatttgggtatccactgagcttgctgactatgac
tgtgtcaaaccttccggaagctacaagaaactatttgatctttttcaagaaaaagcaaat
gcatgtattgaagtctacaaacgcctctcaaaatcttcaggtgggaatccagatttgagt
cttgatgaattgcttgctgctcttgtgagatcattaagtggaagtaagaattttcctcat
ggagcttctattcgtgacttgattgtttcatggggtggttttatttttgatcaacttgtt
agtttggatgagatgcccgaaggtgctgaccgggcttttgttgagctgcccgtgcttgct
gccctgagagacgaaagcaagaaacatgaagcatgtgtaggtgtgaagattccatctgga
gcttccttgaatgcacctttgaagattggagatggagaaaaggtaaataattcaaatggg
ggtgatgaagatgaagacatgaagttggctagggttttgcaagaaaatgaaaattggcaa
tctttgaagcaaaagaaaaggggaagacaagggaattcatcaagcaagttgtacattcag
atcaatgaagatgagatagcaaatgattatcctcttcctgcttattacaagtctgacatt
caagaaactgatgagtatcttatctttgatgattctgacactgttgactcagatcagctt
ccaagaagtatgcttcataattggtcactttataactgtgactcaaggttgatttcactg
gagttacttcctatgaagccatgtgcagacattgatgttacagtttttggatctggaaca
atgactgctgatgatggaagtggattttgtttagataatgatacaagtggttcttcgggt
tccactgatcaactaaatgaagatgggattcctatttatttgagtgctataaaggaatgg
atgattgaatttggatcttcaatggtttttatttcaattcgaactgatatggcctggtat
agactaggaaagccatcaaagcaatatgctccatggtatcaaacagttctcaaaacagca
agacttgccattgccattatcacattgctaaaagagcaaactcgtgcatcaaagttatca
ttttctgaagtcataaaaagattatcagaatttgagaaaagtaaccctgctcacatatca
tcaaaccctgcaattgtagaaagatatgtagtggttcatggccaaattattctacaacaa
tttgcagagttccctgatgacacaatcagaaggtgtgcttttgtgtctggacttgaagac
aaaatggaacaaagacatcacaccaaatggttagtgaagaaaaaggcgattttgacaaaa
gcagaaaacatgaatccaagagcagcaatggggcctgtggtttcaaaaagaaaggcaatg
cctgctacaacaacaaggttgattaataggatttggggcgagttttactcgaattactca
ccagaagtgaaggagggcgatttgataaatgtcaagaaagatgatgaagaagaagaacaa
gaactagaagaaaatgaaaatgaagactgtgaagaacctgaagaagaaagcataacttta
cctcaagaatctgagaaacccaattctgcaacgaagcaaaagaaaactaagagctcaaaa
acagacataagttgggtggggaaatcgattgggaagatgccaggtggcaagaatctttat
aaatctgctgttattagaggagaagtggtggctttaggtggttcagtggcagttgaaaac
cctaaatcagatgatgattctatttattatgtggagtatttgtttgaagattctgattct
agaaagtttgttcatgggagattgatgttaagaggtaaagaaactgttttaggtgacata
gcaagtgaaagggaagtctatttgactaatgattgcttggattttgagcttgatgatgtc
atacaaactgtggttgtgcaaacaagaacacttccatgggggcatcaacatcggaaagct
aatgccagttttgataaagctgatagagcaaaagctgaagaaaggaaaaacaaaggtcta
cctgttgagttttattgtaggagtttatattggccagaaagaggtgctttcttttctttg
aagactgataaaatgggacttgggaatggaatgtgtgattcctgcggaatcatggaggat
gaaaataaaaaggaggtttttgaggttaatgaatcaaagacagggtttatgtatatggca
acaaagtatgatgttgatgactttgtttatgttggttcttatcactttgagtcagatgaa
agggggaatgagactcataaaggtggaaggaatgtagggcttaaagcttatgtcatttgt
cagttgatgaagattgaaacccctaaaaactcaaaactaaatgaccctgattcagttatg
cttcaagttagaagattttatagacctgaggatttgtctttggataaagcatatagatct
gacattcaagaggtgtattacagtgaagaagtccataagttggaagtatcagcaatagaa
ggaaagtgtgaagttagaaggaagaaagacctttcttcacaagacactacatacatcttt
gaccatgtcttcttttgtgaacgcctttatgaccctaaaaagggatctctcaaacagcta
cctgttaacattaagctaagtccacctaaagaaaccccagccaatgaggctgcaattaga
aaaagaaaaggaaagtctaaagaaggagagaatgatgatgttgaaatgactgaaaccaaa
gagggttttacttcaaagaacattttagccactttagatattttcgctggatgtggtggc
ttatctgaaggcttaacaaaagcaggggcatctgtaacaaaatgggcaattgaatacgaa
gagcctgctggtgatgcttttagacttaatcatccagaagcattagcatttgtgaataac
tgcaatgtcatactaaaggctatcatggcagcatgtggtgacgtggatgattgtatttca
actactgaggctgatgaacaagctgcaaagcttgatgaagatatgataaaaaatctacct
cgacctggacaaatagatttcatcaatggtggcccaccatgccaggggttttcgggtatg
aataggttcaatcaaagcacatggagcaaagttcaatgcgaaatgattttagcattttta
tcatttgctgaatactttcgccccaaatactttcttctagaaaatgtcagaaactttgtg
tccttcaataaaggacaaacattccgtttagctcttgcttcacttcttgaaatgggttat
caggtgagatttggaatattagaggctggagcttttggtgtttctcaatcaagaaaacgg
gcattcatttgggcagcttcacctgaagaaatcctgcccgaatggcccgaaccaatgcat
gtgtttgcaagtccagaacttagggtttcactaaatggaaactctcagtatgcagctgct
agaagcactgcatctggtgcaccttttcgtgcaattacagttagagacacaattggtgat
ctccctcctgttggaaatggtgcttctaacccaaccattgagtataaaaacgagcctgtt
tcttggtttcaaaagcggattcgtggagatgcctctgttttaactgatcatatttcaaag
gaaatgaatgagttgaatgtgattaggtgtcaaaggatccctaaacgccctggtgctgat
tggcgtgacctccctgcagaaaaggttaagctgtcaactggacagatggttgaccttata
ccatggtgtttaccaaacacagctaaaaggcataaccaatggaaaggtttatatggaagg
cttgattgggaggggaattttccaacttctattactgatcctcagccaatgggtaaagtt
ggaatgtgttttcaccctgatcaagataggattttaacagttcgtgaatgtgctcgatct
cagggtttccctgatggatataagttctcggggaatattcaacataagcacaagcagatt
ggaaatgcggttcctcctccattggcatatgcattggggaggaaactcaaggaggcacta
gaaataaaacagaagcagttaagcaagtga
DBGET
integrated database retrieval system
