Lactuca sativa (garden lettuce): 111878396
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Entry
111878396 CDS
T05352
Name
(RefSeq) auxin response factor 1
KO
K14486
auxin response factor
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111878396
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
DNA_pol_lambd_f
Motif
Other DBs
NCBI-GeneID:
111878396
NCBI-ProteinID:
XP_023730671
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Position
7:133597419..133603098
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AA seq
655 aa
AA seq
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MAHVAATHFPGGPQSGSSGDAIYKELWHACAGPLVNVPREGERVYYFPQGHMEQLEASMH
QGLDQQLPSFNLPAKILCKVMNVHLRAEPETDEVYAQITLLPDTNQNEVTSPDPPLPEPP
NCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVASDLHGNEWHFR
HIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGENGELRVGVRRLMRLLNNMPSSVI
SSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSLNKYLEAQNHKLSVGMRFKMR
FEGEEVPERRFSGTIVGVGDTASSKWLDSEWRSLKVQWDEPSSILRPDRVSPWELEPLVA
SNTSSNPQPPHRNKRARPPVLPSSMPDLSTLGMWKPPADRHSAFQYCEPQRGRDIYPSNN
VNSISLSYSENGSMPPVSTTSIQWSNLREPLTESFEHVANKENGEKRQSNGYRLFGIELL
EHSTVDETSPVGMGMSRGMTEELRICPLDTESDIPSASCEPEKSSVLHTRQIRSCTKVHM
QGIAVGRAVDLTQFNCYEDLLSKLENMFEIEGELREVPKKWQVVYTDVEDDIMMVGDDPW
HEFCNMVRKIFIYTTEEAKRLSPKIKLPENDEIIQGKPAQDSTEEHSSSNEGSGC
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcacatgttgctgctactcattttcctggagggcctcaatcaggatcctctggtgat
gccatatacaaagaattgtggcatgcctgtgctggccctcttgtcaatgtccctcgtgaa
ggagaacgtgtttattacttccctcaaggccacatggaacagcttgaggcttccatgcat
caaggattagaccagcagctcccatcatttaatttaccagccaaaatactatgtaaagtg
atgaatgttcaccttcgggctgaaccagaaactgatgaagtttatgcacaaataacactc
ttgcctgacacaaatcaaaatgaggtaacaagcccagatcctccacttccagaacctcct
aattgcactgtccactcattctgcaagacacttactgcatctgatacaagcactcatggt
ggattctctgttcttcgtaggcatgcagatgactgtttgcccccactggacatgtcccaa
cagccaccctggcaagaactggttgctagtgatcttcatggcaacgaatggcattttcgt
catattttccgaggtcaacctcgtcgtcacttgttgactactggatggagtgtgtttgtt
agtgcaaaaaagttggttgctggtgacgcttttatctttttaaggggggaaaatggggag
ctacgcgttggagtaaggaggcttatgagacttttaaacaatatgccatcatctgtgata
tcaagtcatagcatgcatcttggtgttcttgctactgcctctcatgcaattgcaactgga
acccttttttcagttttttataaaccaagaactagtcgatcagagttcattgtgagcctt
aacaagtaccttgaagctcaaaaccataagctttcagttggaatgaggtttaaaatgaga
tttgaaggtgaagaggttcctgaaagaaggtttagtgggaccatagttggtgttggagat
accgcatcatcaaaatggctggattctgaatggcgatccctaaaggttcaatgggatgaa
ccctcatcaatattacgcccagatagagtctcaccttgggaactggaaccacttgtagca
tccaacacttcatcaaaccctcaacctccacatagaaataagcgggctcgtcctcccgtc
ttaccttcttccatgccagatctttccacacttgggatgtggaaaccgcctgctgatcgc
cactcagcatttcaatattgtgagccacaacgtgggcgtgatatttacccatcaaataat
gtcaacagtatctccctgagttacagtgaaaatggttctatgccacctgtttccaccaca
tctattcaatggtcaaacttaagggagccactaacagaatcatttgaacatgtggctaat
aaagaaaatggtgaaaagagacagagtaatgggtacagactatttggaatcgagttgctt
gaacactcaactgtggatgaaacttcacccgttggtatgggcatgtctagaggaatgact
gaggaattacgaatatgccctctagatacagaatctgatattccttcagcaagctgtgag
cctgagaaatctagtgtgttgcatactagacaaatccgtagctgcactaaggttcatatg
caaggaattgctgttggtagagctgtagatttgacacaatttaattgttatgaggatttg
ctgagcaaattagaaaatatgtttgaaattgaaggtgaacttcgtgaagtaccaaaaaaa
tggcaagttgtatacacggatgtcgaggatgacatcatgatggttggagatgatccatgg
catgagttttgcaatatggtgagaaagatcttcatatacactaccgaagaagccaagagg
ctttccccaaaaataaaacttccagaaaacgatgaaataatacaagggaaaccggctcaa
gatagcactgaagaacattcatcatcaaatgaaggttctggttgctga
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