Lactuca sativa (garden lettuce): 111878724
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Entry
111878724 CDS
T05352
Name
(RefSeq) KH domain-containing protein SPIN1
KO
K14945
protein quaking
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsv03041
]
111878724
Spliceosome [BR:
lsv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111878724
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
111878724
NCBI-ProteinID:
XP_023730994
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Position
5:complement(350622605..350626307)
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AA seq
274 aa
AA seq
DB search
MSNLYGQNFKSSPASAHSSTHIWANIDGGSSYLERLLEEKEKVAFYVQDIPICNKLLNQE
ILKISEMISNHGYNDFERLQFGSPNRLNHNLSHWDINYPLQHQTTLQGPPIGHGQSSLLT
KKLVRLDVPVDRFPGFNFVGRLLGPRGNSLKRIEALTGCRLFIRGRGSMKDPNKEERLRG
RPDHGHLNEPLHILIEAESPENVVDLTLKQAQEIIQELLKPVTYSKDLYKRQQLRELATL
KSLFGEDTSKPSSSKSTRRCGTMKRATTARKGTM
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacttatatggtcagaacttcaaatcctcgcctgctagtgcccattcttctaca
cacatttgggctaatatagatggtgggagctcatatctggaaaggttgttagaagagaag
gagaaggtggctttctatgtacaagacattcctatttgcaataaattgttgaatcaagag
atactgaagatttctgagatgatatccaaccatggttataatgactttgaaagactacag
tttggaagccctaatcgtttgaatcataatttaagtcattgggatataaattatcctctt
caacatcagacaacactacaaggacctccaattggtcatggccaaagttccttacttaca
aagaagttggtacgcctggatgtgcctgttgatagatttcctggtttcaactttgtggga
aggctccttggtcctagaggcaattccttgaagcgaatagaagctctcacaggatgtcgt
ctcttcatcagaggaaggggttccatgaaagaccctaacaaggaggagcgtttgagggga
agacccgaccatggacaccttaatgaaccacttcatatactgatcgaggcagaatcacct
gaaaatgttgttgatttaacactcaaacaagcacaggaaatcatccaagaattgctcaaa
cctgtgacttattctaaggatctatacaaaagacaacagttacgagaactggctacactg
aagtccctctttggagaagacacctctaagcccagtagtagtaaatctacacgcaggtgt
ggcacaatgaagcgtgccacaaccgctaggaaagggactatgtag
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