Lactuca sativa (garden lettuce): 111878740
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Entry
111878740 CDS
T05352
Name
(RefSeq) 26S proteasome regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
111878740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lsv03051
]
111878740
Proteasome [BR:
lsv03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
111878740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_16
AAA_lid_3
AAA_2
AAA_22
DUF815
RuvB_N
nSTAND3
AAA_28
NPHP3_N
TIP49
AAA_14
RNA_helicase
Mg_chelatase
Sigma54_activat
AAA_24
TsaE
IstB_IS21
AAA_7
Parvo_NS1
AAA_18
AAA_30
NTPase_1
DUF3450
NACHT
AAA_3
AAA_25
ATPase_2
NB-ARC
AAA_33
DUF5906
ABC_tran
DUF6570
Viral_Hsp90
ATPase
AAA_11
AAA_19
AAA_17
Motif
Other DBs
NCBI-GeneID:
111878740
NCBI-ProteinID:
XP_023731013
LinkDB
All DBs
Position
5:complement(350560056..350563987)
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AA seq
411 aa
AA seq
DB search
MESSMLVECKTPPTRLSASTTMDSPLFDNEDDLYTRLKSLERQIEFIEIQEEYVKDEQKN
LKRELLRSQEEVKRIQSVPLVIGQFMEMIDQNNGIVGSTTGSNYYVRILSTINREQLKPS
ASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYSDIGGCDIQKQEIREAVELPLTH
HELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMV
RDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKV
IMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRP
DKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFDFYK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgtccatgctcgttgaatgtaaaacaccaccgactcgtctcagtgcctccacc
accatggactcgcccctcttcgacaacgaagacgacctctacactcgcctaaagtcatta
gagcgtcaaatcgagtttattgaaatccaagaagagtacgtcaaagacgaacaaaagaat
ctcaagcgcgaactccttaggtctcaagaagaagtgaagcggatccaatcggttccgctt
gtgattggtcagttcatggagatgatcgatcaaaataacggtatagtagggtcaactaca
ggatctaattactatgttaggattcttagtacgattaatcgcgagcaattgaaaccctcg
gcgtccgtggccttacaccgtcattcaaatgcgcttgttgacgtgttgccgcctgaggct
gactccagtatatctctccttagccagtcggagaaacctgacgttacctatagtgatatt
ggaggttgtgacattcaaaagcaggaaatacgtgaggctgtggagttgcctttgactcat
catgaattgtacaagcaaataggcatagatcctcctcgtggtgttttgttatatggtcca
cctggcactggtaaaaccatgcttgccaaagctgttgcaaatcataccacagcagccttt
attcgagtagtcggttcagaatttgttcagaagtatttgggtgagggccctagaatggtt
cgtgatgtgtttcggcttgcgaaagagaatgcccctgcaatcatatttattgatgaggtg
gatgcaattgctactgccagatttgatgctcagaccggagcagacagagaagtgcagcga
attctcatggagctcctaaatcagatggatgggtttgaccaaacggtgaatgtgaaggtt
attatggcaactaacagagccgatacattggacccagcacttcttcgtcctggtaggctt
gaccgcaagattgagtttcctttgcctgataggcgacaaaaacgcctcgtttttcaggtt
tgcacggctaaaatgaacttgagtgatgaagttgacttggaagattatgtatctcgccct
gacaagattagtgctgctgagattacggctatttgtcaagaagcagggatgcatgcagtc
cgcaagaacagatatgttattcttcccaaggacttcgagaagggttacagaaccaatgta
aagaagcctgacactgactttgatttctacaagtaa
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