Lactuca sativa (garden lettuce): 111878745
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Entry
111878745 CDS
T05352
Name
(RefSeq) ABC transporter B family member 25, mitochondrial
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111878745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111878745
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
111878745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
Zeta_toxin
AAA_16
AAA_21
AAA_29
AAA_15
DUF87
AAA_24
AAA
AAA_23
APS_kinase
FtsK_SpoIIIE
NB-ARC
nSTAND3
RsgA_GTPase
AAA_18
PRK
Motif
Other DBs
NCBI-GeneID:
111878745
NCBI-ProteinID:
XP_023731017
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All DBs
Position
5:complement(350851381..350857612)
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AA seq
742 aa
AA seq
DB search
MQSTIGSRCGRARQLFLLRRTAANKMTTISSYTNTSTSISRSFLSQNFADASPSSGSSVF
TRQFSVLRRDPWDVSRKSTHVFKHLIAFVSDFSPTPLEKSGSIPKGYASFTTSSGNAAMG
MKQNKKGEEEKSLVTKGDKINNAKILRTLAKYLWMKDNMEFKLRVLTAMGFLVGAKVMIV
QVPFLFKLAVDWLTTATGNPSALSEFTAANSTYLAVFVSPAAVLIGYGIARTGASAFNEL
RTAVFSKVALRTIRSVSRKVFTHLHQLDLRYHLSRETGGLNRIIDRGSRAINFILSAMVF
NVVPTILEISMVSGILAYNFGAPFAWITSLSVAAYVAFTLAVTQWRTKFRQDMNKADNDA
STRAIDSLINYETVKYFNNEKFEADAYDKYLKRYEDAALKTQRSLAFLNFGQTLVFSTAL
SAAMVLSSNGIMNGVGTVGDLVMVNGLLFQLSLPLNFLGSVYRETVQSLVDMKSMFQLLE
ERAEIRDEDDAKPLKLDGGSIEFEDVHFSYLTERKILDGISFVVPAGKSVAIVGTSGSGK
STILRMIFRFFDSNSGTVRIDGQDIRKVTLESLRKHIGVVPQDTVLFNNTIFHNIQYGCL
SSTPEEVYDAARKAAIHDTIMKFPDKYSTLVGERGLKLSGGEKQRVALARAFLKAPPILL
CDEATSALDSTTEAEILSALRSLANNRTAVFIAHRLTTAMQCDEIIVLEGGRVVEQGPHE
VLLSNAGGRYAQLWSQQNTTID
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaacaattggttcaagatgcggtcgggctcgtcagctttttcttcttcggaga
acggcagccaacaagatgacgacgatttcgagctatactaataccagtactagtatttct
cgctcatttctctcacaaaattttgcggatgcttcaccaagttccggtagcagtgttttt
actagacaattctccgttcttcgccgtgatccatgggatgtttcgaggaaatctacgcat
gttttcaaacacttgattgcgtttgtctcggatttctctcctaccccccttgaaaaatct
ggttctatacctaaagggtatgcttcattcacaacatccagtggcaatgctgcaatgggt
atgaagcagaacaaaaaaggggaggaggaaaaaagtctcgttacaaaaggtgacaaaatc
aataatgctaaaatccttagaacacttgcaaagtacttatggatgaaagataacatggag
ttcaaactgagagtcctcactgctatgggatttttggttggagccaaggtaatgattgtt
caagttcccttcttattcaagctagctgttgattggttaacaacagcaacaggaaaccct
agtgcactctctgagttcacagctgctaattcgacatatttagctgtttttgtgagtcca
gcagctgtgttgattggttatggaatagcacggacaggggcttctgctttcaacgagtta
aggactgcagttttctctaaggttgcattgcggactattaggtcagtttcaagaaaggtg
tttacacatttgcaccagcttgatctgcgatatcatcttagccgagaaacaggtggtcta
aatcgaattattgatcgtggtagcagagctattaatttcatcctctcagccatggtattt
aatgttgtaccaactatattagagatttctatggtatcaggtattcttgcatacaatttt
ggagcaccatttgcatggattacttctctttctgttgctgcgtatgttgccttcacgtta
gctgtgacacaatggaggactaaatttaggcaggatatgaacaaagctgataacgatgca
agcactagggctattgactcacttattaattatgagactgtcaagtattttaacaatgag
aaatttgaagctgatgcgtatgataagtatttgaagcgctatgaagatgctgccttgaag
actcaacgtagtctggcttttttaaactttggtcaaactctggtattcagtacagctctg
tcagcagcaatggtactaagttcaaatggtattatgaatggtgtggggacagttggtgat
ttggttatggtaaatgggctactattccagctgtctcttccactcaattttcttgggagt
gtctaccgtgaaactgtgcagagtcttgttgacatgaaatccatgtttcagctacttgag
gagagggcagaaatcagagatgaagatgatgcaaagcctctgaagctggatggtggcagc
attgaatttgaagatgttcatttcagttatctgacagaaagaaagattcttgatggtata
tcttttgttgtgccagctggaaaaagtgtggctattgttggaactagtggcagtggtaaa
tcaacaatccttagaatgatcttcagattctttgactctaattctggaacggtgaggata
gatggtcaagatatacgaaaagtgacacttgaaagccttaggaagcatattggtgttgtt
ccacaagatacagtattattcaacaacacaatattccacaacattcagtatggttgtctc
tcatccacccctgaggaggtatatgatgctgctcgaaaagcagcaattcatgacaccatc
atgaagtttccagacaagtattcaacgcttgttggtgagcgtggccttaagctgagcggt
ggtgagaaacaacgagttgcattagctcgtgcattcctgaaagcgcctcccattttatta
tgtgatgaggcaacgagtgcgctggacagcacaacagaagcggagatcttaagcgcttta
aggtcactggccaataatcgaaccgcagttttcatcgctcataggcttacaaccgcaatg
cagtgcgacgagataatagttctggagggtgggagggttgtagaacaaggtccgcatgaa
gttctgttgtcgaatgctggtggtcgatatgcgcaactctggtcacagcaaaacaccacc
attgattga
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