Lactuca sativa (garden lettuce): 111878903
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Entry
111878903 CDS
T05352
Name
(RefSeq) syntaxin-43
KO
K08489
syntaxin 16
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
111878903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsv04131
]
111878903
Membrane trafficking [BR:
lsv04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
111878903
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
FlxA
EF-G-binding_N
Use1
Phage_CP76
EFL1
MCPsignal
ZSWIM1-3_C
Motif
Other DBs
NCBI-GeneID:
111878903
NCBI-ProteinID:
XP_023731155
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Position
9:complement(223304256..223309188)
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AA seq
323 aa
AA seq
DB search
MATRNRTFLFKKYRDALKSVRAPSSLASSSSRGGAVIELTNAGLLKQNSSYAPLSTEDPG
TSSAGALTVGLPPAWVDVSDEITANVQRARAKMGELAKAHAKALMPSFGDGKEDQHKIEA
LTHEITDLLKKSEKRLKRLSAGGTSEDSNIRKNVQRSLATDLQSLSMELRKKQSTYLKRL
QQQKEGPDGVDLEMNLNGKHSRRDDDDDEFDDMGFNEHQMAKLKKSEAFTVEREKEIQQV
VESVNELAQIMKDLSVLVIDQGTIVDRIDHNIQNVAASVDEGLKQLQKAERSQKRGGMIM
CATVLVIMCFVMLVLLILKEILF
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaggaacagaacgtttctgtttaagaagtatagagatgcattgaagagcgtt
agggctccgtcttcattagcttcttctagctcccgtggtggtgcggtgattgagttaacc
aacgccggtttgcttaaacaaaatagttcttatgctcctcttagtaccgaggatcccggg
acttcttcggcaggtgcattaactgtggggcttcctcctgcttgggttgatgtatctgat
gaaataacagcaaatgtgcaaagagcaagggctaaaatgggagaattagcgaaggcacat
gctaaggctttgatgccatcatttggtgatggaaaagaagatcaacacaagattgaggct
cttacacatgagattactgatcttttaaaaaagtcagaaaaaagattaaagagattatct
gctggtgggacttctgaggattcaaatattaggaaaaatgtgcagcgttctcttgcaact
gatcttcagagtctttcaatggaactccggaaaaagcaatctacttatttaaagcgcctt
caacagcaaaaagagggtccagatggggttgatctagaaatgaatttaaatggaaagcat
tctagaagagatgatgatgatgatgagtttgatgacatgggtttcaatgaacatcaaatg
gcaaagttgaagaaaagtgaggctttcacagtggaaagggagaaagagattcaacaggtt
gtggaatcagtaaatgagctcgctcagatcatgaaggatctttctgtcctcgtcatcgac
cagggaactattgttgataggatagaccacaatattcaaaatgttgcagcgtctgtggat
gaaggccttaagcagctgcaaaaggcggaaagaagtcagaaaagaggggggatgataatg
tgtgcgacagtactagtcatcatgtgttttgttatgttggttctcttaatccttaaagag
attcttttctga
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