Lactuca sativa (garden lettuce): 111879019
Help
Entry
111879019 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111879019
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111879019
Enzymes [BR:
lsv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
111879019
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111879019
Prokaryotic type
111879019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
111879019
NCBI-ProteinID:
XP_023731264
LinkDB
All DBs
Position
9:complement(219929316..219932473)
Genome browser
AA seq
363 aa
AA seq
DB search
MTDDDQSQPLGTDHSPDNRPESPKRPLKIAKLFDEAEAGANRTMGQNPRTIQRYLLAIEY
IGTRFSGAQQQAPNCRTVVGVLQNAFHKFIGQPVSIFCSSRTDAGVHALSNVCHVDVERI
SKRKPSEVLPPHEPSVVKKAVNHFLQKHEGDITIIDVRCVAADFHARYKAQERTYFYRIL
SGPEHLSTFEKGRAWHVPEELDLPAMQKACKILVGLHDFSSFRASGCQAKSPIRNLDELN
VIEVFPSPYFPSAKEREIQNSACSESEGQSCNFNKNKVEWSVGEASLGFGMRRRHRCFVV
TARARSFLYHQVRLLVGAIKSVGTGDFTVSDVERILEAKTVTANGPMAPACGLYLAHVKY
DLP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgacgatcaatcgcagccgttgggaactgatcactcgccggataatcgccct
gaatcccccaagcggccattgaagatcgccaaattattcgacgaagcagaagcgggagca
aatcgaacaatggggcaaaaccctaggacaattcaaaggtacttgcttgccattgagtac
attggaactcgattctctggtgctcagcaacaagcacctaattgcaggaccgttgtcggc
gttctccagaacgcatttcacaagttcatcggtcaaccagtttccattttctgctcgagt
cgtacagatgcaggagtacatgctttatcaaatgtttgtcatgtagatgtagaacgaata
agcaaaagaaaaccaagtgaagtgttgccacctcatgaaccttctgtggtcaagaaagct
gtcaaccatttcttacagaagcatgaaggtgatataacaattattgatgttcgatgtgtt
gctgctgattttcatgctagatataaagctcaagagcgaacttacttctaccggattcta
tcaggtccagaacatttatcaacttttgagaaaggtcgggcatggcatgtgcctgaggaa
ctagatctgcccgcaatgcagaaagcttgcaaaattcttgtgggacttcatgatttcagt
tcgtttcgcgcttctggttgccaggcaaaatcaccaatcagaaacttagatgaacttaac
gttattgaggttttcccatctccatatttcccatcagcaaaggaaagggaaatacaaaat
tctgcatgttctgagtcagaggggcaatcttgtaattttaacaaaaataaagttgaatgg
tctgttggtgaggcgagtctagggtttggaatgaggagaaggcaccgatgctttgtggtt
actgcacgagcgcgttcttttctttaccatcaggttaggcttcttgttggtgctataaaa
tctgtgggtaccggagatttcacggtgtctgatgttgaacgaatcttggaagcaaagaca
gtaacagctaatggtccaatggctcctgcttgtggtctttaccttgctcatgtcaaatac
gatctcccatga
DBGET
integrated database retrieval system
