Lactuca sativa (garden lettuce): 111879022
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Entry
111879022 CDS
T05352
Name
(RefSeq) YTH domain-containing protein ECT4
KO
K20102
YTH domain-containing family protein
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111879022
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111879022
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Pim
Motif
Other DBs
NCBI-GeneID:
111879022
NCBI-ProteinID:
XP_023731267
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Position
9:complement(219980437..219984707)
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AA seq
464 aa
AA seq
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MPGDKMINNHNAVSSVIGKGVTDQSEYYPPTICYDHHHPGNNKTYNHSDGSCHQNSSGAS
FMDNNGSLLYFMPGYNPYAGQTFLGVDGQNRHFPSSEGMPRYLWNSAYSDAGYQNSTSWG
SKSAMVSNGLMKSNAFSSQRFPNYLLDDIQSTSNISQSFLQTPQLYSVNKSGGVAKGYQQ
CSNFSSFPYQNQGLFANYSMIHASKVRDKSYSNGESEELTCGPRAQSSKLEHQEFGNSFK
SDQYNLDGFQTKYEQAKFYIIKSYSEDDVHKCVKYDVWSSTPNGNKKLDIAFLEAEGKRR
ETGSMCPVFLFFSVNGSGQFVGVAEMTGRVVFEKDMDFWQLDKWSGFFPLKWHIIKDIPN
TQLRHIILENNDNRPVTYTRDTQEVGLQQGLEMLDIFKSYPSKTSLLDDLSFYENREKSL
KARRIHKVAFQPERNLKSGEGSMSTNGSLDPTSSLINLRNLSLS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcctggggacaaaatgattaataatcataatgcagtttcttcagtcattggtaagggc
gttacagatcaaagtgaatattatcctcccacaatctgttatgatcatcatcatccagga
aataacaaaacctataatcattcggatggttcttgtcatcaaaattccagtggggcctca
ttcatggataataatggttcacttctctactttatgcctggctacaacccatatgcaggt
cagactttcttgggtgttgatgggcaaaatcgtcatttcccatcatcagaaggcatgcca
cgttacttgtggaattctgcatacagtgatgcaggataccaaaattccacgtcttggggc
tcgaaatctgccatggtttctaatggtttaatgaagtcaaatgcttttagttcccaaaga
ttcccaaattaccttcttgatgatatacagtcaacatctaatatctctcagtcgtttctt
cagactccacaactctactcagttaacaagtctggaggtgttgcaaaagggtatcaacaa
tgttcaaatttctcatcttttccctatcaaaaccaaggcctttttgcaaactattccatg
atccatgcttccaaagtgagagataaatcatactcaaatggagaatctgaagaattaact
tgtgggcctagggctcaaagcagcaaactcgagcatcaagaatttgggaattcctttaaa
agtgatcagtataatcttgatgggtttcagactaaatatgaacaagctaagttctacata
atcaagtcatacagtgaagacgatgttcataagtgtgttaaatatgatgtttggtcaagc
acgccaaatggcaacaagaagttggatattgcttttcttgaggctgaaggaaaaagaaga
gaaacagggtcaatgtgtccggttttcttatttttttcagtaaatgggagcggacagttt
gtgggagttgctgaaatgacagggcgagttgtttttgaaaaagacatggatttttggcaa
cttgataaatggagtggctttttcccattaaaatggcatattataaaagacatccccaac
acacaattaagacacattattcttgaaaacaatgataatcggcctgttacttacactagg
gacactcaggaggttggattacaacaaggtttagaaatgcttgatattttcaaaagctat
ccatcaaaaacatctttgctagatgacttgagcttctatgagaatcgtgagaagtcactt
aaagccagaaggattcacaaagttgccttccaaccagagaggaatttaaaatcgggagaa
ggatcaatgagcacaaatgggtcgttggatccaacttcatctctcatcaatctacgaaat
ttgtctcttagttga
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