Lactuca sativa (garden lettuce): 111879179
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Entry
111879179 CDS
T05352
Name
(RefSeq) transcription factor SPATULA
KO
K28361
transcription factor SPT/ALC
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111879179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsv03000
]
111879179
Transcription factors [BR:
lsv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
111879179
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
CENPU
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
111879179
NCBI-ProteinID:
XP_023731421
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Position
4:362157699..362159168
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AA seq
270 aa
AA seq
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MADMFDTPRISSSYSPPPESTDDISLLLRQILFKSASSSSSSSFSLTPKQMQYEFQRQQP
PYSSGLSISDQIPTLSSTGVTHIPANTMAHVSSSSVGTMDYDPDEYDCESEEGFENLMDE
MVAKQNPPRNPSKRTRAAEVHNLSEKRRRSKINEKMKALQKLIPNSNKTDKASMLDEAIE
YLKQLQLQVQMLTMRNGINLYSMCAPANQRTGGLNFGNQSGNMTANQEPVVNPMFSLPVQ
CAGVGQNPPSILDFSRSMNHEAPFGTQLGS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatgttcgatacaccacgcatttcttcttcatattctccgccgcctgaatcc
accgatgacatttcccttctccttcgtcagatcctgtttaaatcagcatcttcttcttct
tcttcatccttttctctcactcccaaacaaatgcagtatgaattccaacgccaacaaccg
ccgtattcctccgggctttccatttccgatcagatccccacgttatcttctaccggtgtt
actcacattccggcgaataccatggctcatgtctcttcttcttctgtgggtactatggat
tatgacccagatgaatacgattgcgaaagtgaggagggattcgaaaacttgatggatgaa
atggtcgcaaaacaaaatcctcctcgtaatccttcaaaacgaacacgagcagctgaggtt
cataatttgtccgaaaagagaaggagaagcaagataaatgagaagatgaaggccttgcag
aagcttatccccaattcaaataagacggataaagcttcaatgctggatgaagctattgaa
tatctgaagcagcttcagctccaagttcagatgttgacgatgagaaatgggataaacttg
tactccatgtgtgctccggcgaaccagagaaccggtgggttgaactttggaaaccagtcc
ggcaacatgacggcgaaccaagaaccggtggtgaacccgatgtttagcctcccggttcaa
tgcgccggcgtcggccaaaacccgccgtcgatacttgacttttcccggtcgatgaatcac
gaagctccgtttggaactcaactgggatcttga
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