Lactuca sativa (garden lettuce): 111879374
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Entry
111879374 CDS
T05352
Name
(RefSeq) uncharacterized protein LOC111879374
KO
K15559
regulator of Ty1 transposition protein 103
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111879374
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111879374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
CCDC144C
CTK3
CREPT
Drf_FH1
PCRF
Motif
Other DBs
NCBI-GeneID:
111879374
NCBI-ProteinID:
XP_023731582
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All DBs
Position
9:complement(35559118..35566414)
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AA seq
506 aa
AA seq
DB search
MSDDVFDGQMLADKLSKLNSSQQSIESLSHLCMSQRKKAKQIVGIWHKSFKSAQKEQHVA
FLYLANDILQNSRRKGSEFVSEFWKVMPSALKHVNEHGDANGKKAASRLVGIWDERKVFG
SRGQNLKDEMLGKSPPTPLTTNGQTSTSTSTSNPIKIVKRDANSLRLKLAVGDIPEKIMT
AMHAVHDESGMEDTALNNCEAAVRRFGNLERDIETQGVALGPSLVEEIQEQENVLEECVT
QLETAERTRTSLISQLKQALQDQELKLDVIQSQLQVARHQIDDAVNLRKKLVSPSLPPTQ
NQPQPPPELTTESMSSYGTTTHVAEEDNKKAAAAAVAAKLAASTSSAQMLASALSSLVAE
EAAAFNSPGLSIFSPEKRQKLEKPMPVSDLTNSNSDSGYFSNNQTPFPPPPPLPPSSMSS
PANQFVQSSGLMMPPYVYGASSLPPPPPLPSHIAMGLMRPGHQQQQQQQNPSQPPPTNGG
GYYRPPGIGFYGQGHQPTPPPPVPRQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgatgtttttgatggacaaatgctggcagacaagctgtctaaactcaacagt
tctcaacaaagtatagaatcactatcccatttgtgtatgtcacagaggaagaaagccaaa
cagattgttggaatatggcataaatcattcaaatctgctcagaaagagcaacatgttgct
tttctgtatttagccaatgacattttgcaaaatagtaggcggaagggcagtgagtttgtg
agtgaattttggaaggtcatgccttcagccctcaagcatgttaatgaacatggtgatgca
aatgggaagaaagcagcatcaagactggttggcatatgggatgaaaggaaggtttttgga
tcccgtggtcagaatctgaaagatgaaatgcttggtaaaagccctcccactccattgact
accaatggacagacttctacttctacttctacttctaaccccatcaagatagtgaaaagg
gatgccaactcattgagacttaaattggctgtgggggatatcccagaaaagataatgact
gctatgcatgcggtacatgatgagagtggcatggaagataccgccttaaacaactgtgaa
gctgctgttcgccgttttggaaatttggagagagatattgaaactcaaggagttgcacta
ggaccttcattggtagaagagatacaggagcaagaaaatgtacttgaagaatgtgtcacc
cagcttgaaactgctgaaaggaccagaacctcattgatttcccagcttaaacaagcactc
caggatcaagaattgaagctagatgttattcagagccagttgcaagttgctcggcatcaa
attgatgatgctgtaaatttaaggaagaaattggtatcaccttctcttcctccaacccaa
aaccaaccacaaccaccacctgaactcacaactgaatccatgtcttcttacggaaccacc
acgcatgtcgcagaagaagacaacaagaaagccgccgcagctgccgtcgccgccaagctt
gccgcctccacctcctccgcgcagatgcttgcctccgccctctcttctctagttgctgag
gaggctgctgcctttaattcccccggattatccatattctcaccagaaaaacgacagaag
cttgaaaaaccaatgcccgtctctgatttgaccaattccaattccgattccggttatttc
tccaacaaccaaacaccattcccaccaccaccaccgctgccgccatcgtccatgagctct
ccggcgaatcaatttgttcagtcctctggattaatgatgccgccgtatgtgtatggtgcc
agcagcctgccaccgccaccccctttgccgtcacatattgcaatggggttgatgaggcct
ggccaccagcagcagcagcaacaacagaacccgtctcagccaccaccaacaaatggtggt
ggatactaccggccgccaggtattgggttttacgggcaagggcatcagccgacaccacca
ccgcctgtgccccgccagtga
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